Amber Developers Archive Apr 2010: by subject

[AMBER-Developers] 31 March release candidates for Amber
- Volodymyr Babin (Sat Apr 03 2010 - 07:52:13 PDT)
- case (Sat Apr 03 2010 - 07:27:38 PDT)
- Volodymyr Babin (Fri Apr 02 2010 - 21:47:36 PDT)
- case (Fri Apr 02 2010 - 20:25:31 PDT)
- Volodymyr Babin (Fri Apr 02 2010 - 18:26:48 PDT)
- case (Fri Apr 02 2010 - 18:03:30 PDT)
- Volodymyr Babin (Fri Apr 02 2010 - 14:08:53 PDT)
- Jason Swails (Fri Apr 02 2010 - 14:05:01 PDT)
- case (Fri Apr 02 2010 - 13:03:14 PDT)
- Volodymyr Babin (Fri Apr 02 2010 - 09:54:46 PDT)
- case (Fri Apr 02 2010 - 07:14:03 PDT)
- Mengjuei Hsieh (Thu Apr 01 2010 - 20:52:13 PDT)
- case (Thu Apr 01 2010 - 19:04:10 PDT)
- Tyler Luchko (Thu Apr 01 2010 - 12:25:54 PDT)
- Jason Swails (Thu Apr 01 2010 - 11:27:45 PDT)
- case (Thu Apr 01 2010 - 11:15:01 PDT)
- Jason Swails (Thu Apr 01 2010 - 10:56:28 PDT)
- Tyler Luchko (Thu Apr 01 2010 - 10:46:19 PDT)
- Jason Swails (Thu Apr 01 2010 - 09:43:09 PDT)
- case (Thu Apr 01 2010 - 07:03:44 PDT)
- Jason Swails (Thu Apr 01 2010 - 06:40:04 PDT)
- case (Thu Apr 01 2010 - 05:34:27 PDT)
[AMBER-Developers] [Low Priority] Patch for PowerPC Mac
- case (Fri Apr 23 2010 - 06:41:05 PDT)
- Mengjuei Hsieh (Thu Apr 22 2010 - 17:03:26 PDT)
[AMBER-Developers] Almost ready for first Amber11 release candidate
- Carlos Simmerling (Tue Apr 27 2010 - 12:50:56 PDT)
- case (Tue Apr 27 2010 - 12:42:26 PDT)
- Mengjuei Hsieh (Tue Apr 27 2010 - 12:09:36 PDT)
[AMBER-Developers] Amber10 Cuda compile failure
- case (Mon Apr 12 2010 - 19:09:50 PDT)
- Robert Duke (Mon Apr 12 2010 - 15:29:53 PDT)
- Mark Williamson (Mon Apr 12 2010 - 15:23:57 PDT)
[AMBER-Developers] AmberTools configure failure and compilation errors
- Sally Pias (Sun Apr 11 2010 - 08:36:06 PDT)
- case (Sun Apr 11 2010 - 06:51:16 PDT)
- Sally Pias (Sat Apr 10 2010 - 23:28:01 PDT)
[AMBER-Developers] compilation issues with RC 3/31
- Jason Swails (Thu Apr 01 2010 - 15:22:55 PDT)
- Tyler Luchko (Thu Apr 01 2010 - 13:32:47 PDT)
- Jason Swails (Thu Apr 01 2010 - 12:55:57 PDT)
[AMBER-Developers] Configure and Ubuntu
- case (Fri Apr 02 2010 - 10:49:20 PDT)
- Ross Walker (Fri Apr 02 2010 - 08:39:19 PDT)
[AMBER-Developers] Crunch time for Amber11/AmberTools-1.4 release
- Mengjuei Hsieh (Sun Apr 11 2010 - 03:56:08 PDT)
- case (Fri Apr 09 2010 - 05:10:18 PDT)
[AMBER-Developers] decpr and TI decomp
- Carlos Simmerling (Fri Apr 23 2010 - 08:10:59 PDT)
[AMBER-Developers] Error counting in test scripts
- case (Thu Apr 01 2010 - 18:07:33 PDT)
- Ben Roberts (Thu Apr 01 2010 - 16:55:56 PDT)
[AMBER-Developers] EVB test errors
- Kim F. Wong (Fri Apr 02 2010 - 06:27:07 PDT)
- Daniel Roe (Fri Apr 02 2010 - 06:21:38 PDT)
- Daniel Roe (Fri Apr 02 2010 - 06:15:38 PDT)
- Daniel Roe (Fri Apr 02 2010 - 06:14:06 PDT)
- case (Fri Apr 02 2010 - 05:59:51 PDT)
- Kim F. Wong (Fri Apr 02 2010 - 05:31:55 PDT)
- Daniel Roe (Fri Apr 02 2010 - 05:22:53 PDT)
- Kim F. Wong (Thu Apr 01 2010 - 19:04:46 PDT)
- case (Thu Apr 01 2010 - 18:58:15 PDT)
- Daniel Roe (Thu Apr 01 2010 - 15:18:32 PDT)
[AMBER-Developers] false test failures
- case (Sun Apr 11 2010 - 06:30:20 PDT)
- Jason Swails (Sat Apr 10 2010 - 22:03:56 PDT)
- Sally Pias (Sat Apr 10 2010 - 21:05:26 PDT)
- Scott Brozell (Thu Apr 08 2010 - 21:49:50 PDT)
- Sally Pias (Thu Apr 08 2010 - 18:03:36 PDT)
- Ross Walker (Thu Apr 08 2010 - 12:02:24 PDT)
- case (Thu Apr 08 2010 - 05:23:45 PDT)
- Sally Pias (Wed Apr 07 2010 - 23:58:56 PDT)
[AMBER-Developers] final (!?!) release candidate for Amber11
- MengJuei Hsieh (Tue Apr 20 2010 - 00:54:06 PDT)
- David A. Case (Tue Apr 20 2010 - 00:30:27 PDT)
- MengJuei Hsieh (Mon Apr 19 2010 - 15:01:37 PDT)
- Daniel Roe (Sat Apr 17 2010 - 08:30:57 PDT)
- David A. Case (Sat Apr 17 2010 - 01:53:52 PDT)
- Volodymyr Babin (Fri Apr 16 2010 - 19:56:00 PDT)
- Daniel Roe (Fri Apr 16 2010 - 19:29:23 PDT)
- Ben Roberts (Fri Apr 16 2010 - 18:20:35 PDT)
- Mengjuei Hsieh (Fri Apr 16 2010 - 18:06:55 PDT)
- Tom Joseph (Fri Apr 16 2010 - 14:58:12 PDT)
- Ben Roberts (Fri Apr 16 2010 - 14:51:43 PDT)
- Daniel Roe (Fri Apr 16 2010 - 14:42:00 PDT)
- Daniel Roe (Fri Apr 16 2010 - 13:59:56 PDT)
- Tom Joseph (Fri Apr 16 2010 - 12:53:45 PDT)
- Andreas Goetz (Fri Apr 16 2010 - 12:25:53 PDT)
- Jason Swails (Fri Apr 16 2010 - 12:19:09 PDT)
- Andreas Goetz (Fri Apr 16 2010 - 12:12:24 PDT)
- Jason Swails (Fri Apr 16 2010 - 11:29:10 PDT)
- Jason Swails (Fri Apr 16 2010 - 11:27:34 PDT)
- Ben Roberts (Fri Apr 16 2010 - 11:18:08 PDT)
- Gustavo Seabra (Fri Apr 16 2010 - 11:11:25 PDT)
- Andreas Goetz (Fri Apr 16 2010 - 10:53:25 PDT)
- Jason Swails (Fri Apr 16 2010 - 09:04:38 PDT)
- Gustavo Seabra (Fri Apr 16 2010 - 08:39:42 PDT)
- Ben Roberts (Fri Apr 16 2010 - 08:28:14 PDT)
- Andreas Svrcek-Seiler (Fri Apr 16 2010 - 05:19:33 PDT)
- Volodymyr Babin (Thu Apr 15 2010 - 16:51:03 PDT)
- Volodymyr Babin (Thu Apr 15 2010 - 16:49:55 PDT)
- David A. Case (Thu Apr 15 2010 - 15:11:15 PDT)
- David A. Case (Thu Apr 15 2010 - 15:04:48 PDT)
- Jason Swails (Thu Apr 15 2010 - 15:00:55 PDT)
- David A. Case (Thu Apr 15 2010 - 14:53:30 PDT)
- Volodymyr Babin (Thu Apr 15 2010 - 11:26:17 PDT)
- Jason Swails (Thu Apr 15 2010 - 11:02:15 PDT)
- steinbrt.rci.rutgers.edu (Thu Apr 15 2010 - 04:39:17 PDT)
- Mengjuei Hsieh (Wed Apr 14 2010 - 16:58:44 PDT)
- Volodymyr Babin (Wed Apr 14 2010 - 16:07:04 PDT)
- Jason Swails (Wed Apr 14 2010 - 16:04:04 PDT)
- Jason Swails (Wed Apr 14 2010 - 15:57:34 PDT)
- Mengjuei Hsieh (Wed Apr 14 2010 - 15:42:25 PDT)
- David A. Case (Wed Apr 14 2010 - 15:31:49 PDT)
- Jason Swails (Wed Apr 14 2010 - 14:25:09 PDT)
- David A. Case (Wed Apr 14 2010 - 13:11:04 PDT)
[AMBER-Developers] finding intel libraries
- Scott Brozell (Sun Apr 04 2010 - 18:44:02 PDT)
[AMBER-Developers] gcc 4.4.0 amber parallel tests
- case (Tue Apr 13 2010 - 10:03:38 PDT)
[AMBER-Developers] Getting access to the amber.git repository
- case (Mon Apr 26 2010 - 12:46:28 PDT)
[AMBER-Developers] ig = -1
- Jason Swails (Tue Apr 13 2010 - 08:30:20 PDT)
- case (Tue Apr 13 2010 - 08:22:06 PDT)
- Gustavo Seabra (Tue Apr 13 2010 - 07:12:03 PDT)
- Adrian Roitberg (Tue Apr 13 2010 - 06:42:01 PDT)
[AMBER-Developers] Issues with MPICH-1.2.1p1
- Robert Duke (Wed Apr 14 2010 - 06:07:16 PDT)
- Ross Walker (Tue Apr 13 2010 - 21:23:12 PDT)
- Robert Duke (Tue Apr 13 2010 - 20:04:19 PDT)
- Ross Walker (Tue Apr 13 2010 - 17:07:49 PDT)
- Mark Williamson (Tue Apr 13 2010 - 17:01:52 PDT)
- Robert Duke (Tue Apr 13 2010 - 16:39:55 PDT)
- Ross Walker (Tue Apr 13 2010 - 16:12:01 PDT)
[AMBER-Developers] jar error opensuse 11.1
- Ross Walker (Thu Apr 08 2010 - 20:24:16 PDT)
- Gustavo Seabra (Thu Apr 08 2010 - 20:03:41 PDT)
- Jason Swails (Thu Apr 08 2010 - 18:41:40 PDT)
- Gustavo Seabra (Thu Apr 08 2010 - 18:30:01 PDT)
- Thorsten M Woelfle (Thu Apr 08 2010 - 16:15:20 PDT)
[AMBER-Developers] looking for the AmberTools-1.2.tar.bz2 file
- case (Wed Apr 28 2010 - 09:24:58 PDT)
[AMBER-Developers] Minor parallel NAB issue
- Jason Swails (Mon Apr 12 2010 - 13:31:07 PDT)
- Lachele Foley (Mon Apr 12 2010 - 13:26:34 PDT)
- Jason Swails (Mon Apr 12 2010 - 13:24:09 PDT)
- Lachele Foley (Mon Apr 12 2010 - 13:19:55 PDT)
[AMBER-Developers] mmpbsa tests (perl and python)
- case (Sat Apr 03 2010 - 14:51:29 PDT)
- MengJuei Hsieh (Fri Apr 02 2010 - 18:14:28 PDT)
[AMBER-Developers] MPICH2 testing and configure_mpich2
- Tyler Luchko (Tue Apr 20 2010 - 08:17:05 PDT)
[AMBER-Developers] near-final testing
- MengJuei Hsieh (Thu Apr 15 2010 - 15:39:46 PDT)
- MengJuei Hsieh (Wed Apr 14 2010 - 00:49:24 PDT)
- David A. Case (Tue Apr 13 2010 - 19:51:59 PDT)
- Tyler Luchko (Tue Apr 13 2010 - 16:10:50 PDT)
- Mengjuei Hsieh (Tue Apr 13 2010 - 12:41:07 PDT)
- Jason Swails (Tue Apr 13 2010 - 11:25:30 PDT)
- case (Tue Apr 13 2010 - 11:18:10 PDT)
- Tyler Luchko (Tue Apr 13 2010 - 11:12:39 PDT)
- Jason Swails (Tue Apr 13 2010 - 10:59:13 PDT)
- Tyler Luchko (Tue Apr 13 2010 - 10:16:23 PDT)
- Mark Williamson (Tue Apr 13 2010 - 09:38:15 PDT)
- Jason Swails (Tue Apr 13 2010 - 08:51:42 PDT)
- Mark Williamson (Tue Apr 13 2010 - 08:44:39 PDT)
- Jason Swails (Tue Apr 13 2010 - 08:39:54 PDT)
- case (Tue Apr 13 2010 - 08:31:52 PDT)
- case (Tue Apr 13 2010 - 07:37:26 PDT)
- steinbrt.rci.rutgers.edu (Tue Apr 13 2010 - 07:18:22 PDT)
- Jason Swails (Tue Apr 13 2010 - 06:57:46 PDT)
- case (Mon Apr 12 2010 - 19:15:08 PDT)
- MengJuei Hsieh (Mon Apr 12 2010 - 17:33:22 PDT)
- Scott Brozell (Mon Apr 12 2010 - 15:16:46 PDT)
- Daniel Roe (Mon Apr 12 2010 - 12:16:11 PDT)
- Ben Roberts (Mon Apr 12 2010 - 11:55:43 PDT)
- case (Mon Apr 12 2010 - 08:12:16 PDT)
- Daniel Roe (Mon Apr 12 2010 - 08:04:56 PDT)
- Volodymyr Babin (Mon Apr 12 2010 - 08:04:26 PDT)
- case (Mon Apr 12 2010 - 06:04:32 PDT)
[AMBER-Developers] never mind about AmberTools-1.2
- case (Wed Apr 28 2010 - 09:26:15 PDT)
[AMBER-Developers] numprocs.awk problem
- David A. Case (Wed Apr 21 2010 - 10:01:04 PDT)
[AMBER-Developers] problem installing pmemd.cuda
- Jason Swails (Fri Apr 02 2010 - 14:14:13 PDT)
[AMBER-Developers] problem with MMPBSA.py (and patch)
- David A. Case (Sat Apr 17 2010 - 23:51:26 PDT)
- Jason Swails (Sat Apr 17 2010 - 07:11:06 PDT)
[AMBER-Developers] Problems building sander.RISM.MPI
- Jason Swails (Tue Apr 06 2010 - 16:18:08 PDT)
- Tyler Luchko (Tue Apr 06 2010 - 16:17:01 PDT)
- Ross Walker (Tue Apr 06 2010 - 16:06:27 PDT)
[AMBER-Developers] Problems compiling on Ranger.
- case (Fri Apr 09 2010 - 10:12:55 PDT)
- Ross Walker (Fri Apr 09 2010 - 09:17:13 PDT)
- Scott Brozell (Fri Apr 09 2010 - 00:48:22 PDT)
- case (Thu Apr 08 2010 - 05:13:50 PDT)
- Scott Brozell (Wed Apr 07 2010 - 19:15:21 PDT)
- Scott Brozell (Wed Apr 07 2010 - 16:45:33 PDT)
- Ross Walker (Wed Apr 07 2010 - 13:37:45 PDT)
[AMBER-Developers] Problems with PGF90
- case (Mon Apr 05 2010 - 17:30:17 PDT)
- Scott Brozell (Mon Apr 05 2010 - 14:27:41 PDT)
- Ross Walker (Mon Apr 05 2010 - 13:33:12 PDT)
[AMBER-Developers] release plans
- Mark Williamson (Mon Apr 26 2010 - 17:03:31 PDT)
- Mengjuei Hsieh (Mon Apr 26 2010 - 14:40:21 PDT)
- Timothy J Giese (Mon Apr 26 2010 - 13:09:11 PDT)
- Mark Williamson (Mon Apr 26 2010 - 12:48:31 PDT)
- Ross Walker (Mon Apr 26 2010 - 12:05:51 PDT)
- Ben Roberts (Mon Apr 26 2010 - 10:55:33 PDT)
- Tyler Luchko (Wed Apr 21 2010 - 09:44:52 PDT)
- Ben Roberts (Tue Apr 20 2010 - 18:03:29 PDT)
- MengJuei Hsieh (Tue Apr 20 2010 - 11:23:15 PDT)
- Gustavo Seabra (Tue Apr 20 2010 - 05:41:28 PDT)
- David A. Case (Tue Apr 20 2010 - 05:32:35 PDT)
- Gustavo Seabra (Tue Apr 20 2010 - 05:27:12 PDT)
- David A. Case (Tue Apr 20 2010 - 03:16:58 PDT)
- David A. Case (Tue Apr 20 2010 - 02:16:17 PDT)
- David A. Case (Tue Apr 20 2010 - 00:07:08 PDT)
- Mengjuei Hsieh (Mon Apr 19 2010 - 19:05:11 PDT)
- Robert Duke (Mon Apr 19 2010 - 14:34:18 PDT)
- Daniel Roe (Mon Apr 19 2010 - 14:26:55 PDT)
- Ross Walker (Mon Apr 19 2010 - 13:53:34 PDT)
- Robert Duke (Mon Apr 19 2010 - 13:42:21 PDT)
- Ross Walker (Mon Apr 19 2010 - 13:23:24 PDT)
- Daniel Roe (Mon Apr 19 2010 - 12:44:53 PDT)
- Timothy J Giese (Mon Apr 19 2010 - 08:16:21 PDT)
- Timothy J Giese (Mon Apr 19 2010 - 08:07:42 PDT)
- Tyler Luchko (Mon Apr 19 2010 - 07:59:35 PDT)
- Timothy J Giese (Mon Apr 19 2010 - 07:51:39 PDT)
- Daniel Roe (Mon Apr 19 2010 - 05:35:43 PDT)
- Andreas Svrcek-Seiler (Sun Apr 18 2010 - 22:56:32 PDT)
- Scott Brozell (Sun Apr 18 2010 - 16:34:03 PDT)
- David A. Case (Sun Apr 18 2010 - 02:11:19 PDT)
[AMBER-Developers] release plans - one source of error found
- case (Fri Apr 23 2010 - 07:55:02 PDT)
- Andreas Svrcek-Seiler (Wed Apr 21 2010 - 07:00:48 PDT)
[AMBER-Developers] sander_pbsa_* test cases update
- Mengjuei Hsieh (Wed Apr 07 2010 - 15:58:39 PDT)
[AMBER-Developers] Slideshow: A Cretaceous Menagerie Preserved in Amber
- Gustavo Seabra (Fri Apr 16 2010 - 07:41:04 PDT)
[AMBER-Developers] Some addition to documentation of PBSA.
- MengJuei Hsieh (Fri Apr 23 2010 - 16:42:05 PDT)
[AMBER-Developers] Suggestions for dealing with mpich2-1.2.1p1
- David A. Case (Tue Apr 20 2010 - 04:34:20 PDT)
- Robert Duke (Mon Apr 19 2010 - 12:25:40 PDT)
- Mark Williamson (Mon Apr 19 2010 - 11:28:54 PDT)
- Mark Williamson (Sat Apr 17 2010 - 15:23:56 PDT)
- Scott Brozell (Fri Apr 16 2010 - 17:56:48 PDT)
- Robert Duke (Fri Apr 16 2010 - 09:38:39 PDT)
- Robert Duke (Fri Apr 16 2010 - 09:31:05 PDT)
- Mark Williamson (Fri Apr 16 2010 - 09:30:28 PDT)
- Robert Duke (Fri Apr 16 2010 - 09:25:07 PDT)
- Mark Williamson (Fri Apr 16 2010 - 09:13:26 PDT)
- Robert Duke (Fri Apr 16 2010 - 07:24:19 PDT)
- Jason Swails (Thu Apr 15 2010 - 21:28:41 PDT)
- Ross Walker (Thu Apr 15 2010 - 21:09:28 PDT)
[AMBER-Developers] ti_decomp_sc problem
- steinbrt.rci.rutgers.edu (Tue Apr 13 2010 - 08:55:33 PDT)
[AMBER-Developers] two more tasks for the amber11 release
- Ross Walker (Wed Apr 21 2010 - 18:57:19 PDT)
- Mengjuei Hsieh (Wed Apr 21 2010 - 18:46:29 PDT)
- David A. Case (Wed Apr 21 2010 - 02:20:58 PDT)
[AMBER-Developers] Windows native executable, bin and exe directories, symbolic link
- case (Sat Apr 24 2010 - 05:12:03 PDT)
- Andreas Goetz (Sat Apr 24 2010 - 00:03:59 PDT)
[mpich-discuss] MPICH2 with MPI-1 code]
- Mark Williamson (Wed Apr 14 2010 - 13:36:10 PDT)
candidate amber 11 from 3/31: problem with pmemd.cuda?
- Ross Walker (Mon Apr 05 2010 - 13:03:08 PDT)
near-final testing)
- David A. Case (Sat Apr 17 2010 - 02:37:01 PDT)
- Mengjuei Hsieh (Thu Apr 15 2010 - 18:38:57 PDT)
problem installing pmemd.cuda
- Jason Swails (Fri Apr 02 2010 - 18:51:26 PDT)
- case (Fri Apr 02 2010 - 18:11:29 PDT)
- Jason Swails (Fri Apr 02 2010 - 15:00:40 PDT)
- Jason Swails (Fri Apr 02 2010 - 14:25:22 PDT)
problem with MMPBSA.py (and patch)
- Jason Swails (Sat Apr 17 2010 - 07:12:20 PDT)
Some addition to documentation of PBSA.
- Mengjuei Hsieh (Fri Apr 23 2010 - 17:34:36 PDT)

Amber Developers Archive Apr 2010 by subject