Re: [AMBER-Developers] 31 March release candidates for Amber

From: Jason Swails <jason.swails.gmail.com>
Date: Thu, 1 Apr 2010 09:40:04 -0400

Hello,

If I need to make a small change to the manual (details about
MMPBSA.py have changed, especially regarding its installation and
where it is included), where should I do that? They're small changes,
but should probably find their way in there before release.

Thanks!
Jason

On Thu, Apr 1, 2010 at 8:34 AM, case <case.biomaps.rutgers.edu> wrote:
> Latest RC is here:
>
>   http://ambermd.org/downloads/AmberTools.31mar10.tar.bz2
>   http://ambermd.org/downloads/Amber11.31mar10.tar.bz2
>
> Notes:
>
> 1. EVB tests are still broken, but I think that Dan and/or Mark are working
>   on that.
>
> 2. Does anyone use ti-decomp?  Do we have an example (preferably small)
>   that is known to work?  Do we know that Amber10 was working correctly?
>
> 3. This RC contains the cuda test cases (but not the 2_million_atom one).
>   But I haven't tested the CUDA stuff myself.
>
> 4. Please report most things to the wiki:
>      http://ambermd.org/pmwiki/pmwiki.php/Main/Amber11test
>
>   I've updated a couple of platforms for this RC.  If something becomes
>   obsolete, (e.g. gets fixed!) please remove it from the wiki, so that
>   we can keep that as clean as possible.  (I reserve the right to edit or
>   remove things that get out of date.)
>
> Thanks to everyone who worked hard on running the test cases over the last
> few days!  There was a gigantic change of directory structure, which led to
> glitches...I hope we are getting down more to "real" errors now.
>
> ....dac
>
>
> _______________________________________________
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> AMBER-Developers.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber-developers
>



-- 
---------------------------------------
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Graduate Student
352-392-4032
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Received on Thu Apr 01 2010 - 07:00:04 PDT
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