Scott Brozell wrote:
> Hi,
>
> On Fri, Apr 16, 2010 at 12:38:39PM -0400, Robert Duke wrote:
>> I would try Alexey Onofriev's monster GB benchmark if you really want to
>> see what happens. This thing has lots of atoms so the arrays are big. I
>> expect Ross has it lying around; if not I can forward you a copy but will
>> have to dig out the mdin from another machine (it is a big prmtop/inpcrd -
>> at least 2 MB zipped).
>
> If you dont already have it then i can send it:
>
> 34068 -rw-r--r-- 1 sbrozell case 34843537 Jan 26 10:20 chromatin_104.crd.tar.bz2
> 21040 -rw-r--r-- 1 sbrozell case 21515784 Jan 23 10:54 chromatin_104.in.pdb.tar.bz2
> 147044 -rw-r--r-- 1 sbrozell case 150421212 Jan 23 10:55 chromatin_104.top.tar.bz2
>
> scott
>
>
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Hi Scott,
Thanks, but I think I already have it. I'm currently using one from the
CUDA test dir (amber11/test/cuda/nucleosome), however I'm having a few
technical issues with the cluster here at SDSC. I should have something
soon.
regards,
Mark
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Received on Sat Apr 17 2010 - 15:30:02 PDT
