Amber Developers Archive Nov 2011: by subject

[AMBER-Developers] [AMBER] bashrc problems
- Jason Swails (Fri Nov 04 2011 - 15:23:46 PDT)
- Ross Walker (Fri Nov 04 2011 - 14:59:56 PDT)
- Ross Walker (Fri Nov 04 2011 - 13:02:29 PDT)
- David A Case (Fri Nov 04 2011 - 12:52:46 PDT)
[AMBER-Developers] A Parameter File Editor (that DOESN'T pipe everything through leap); parmed.py
- Daniel Roe (Wed Nov 16 2011 - 09:42:07 PST)
[AMBER-Developers] Accuracy of the LCPO approximation
- Eric Pettersen (Fri Nov 18 2011 - 10:30:45 PST)
- Scott Le Grand (Fri Nov 18 2011 - 10:28:27 PST)
- Eric Pettersen (Fri Nov 18 2011 - 08:40:45 PST)
- Ken Merz (Fri Nov 18 2011 - 03:54:09 PST)
- Scott Le Grand (Thu Nov 17 2011 - 18:53:55 PST)
- Ken Merz (Thu Nov 17 2011 - 14:39:34 PST)
- Scott Le Grand (Thu Nov 17 2011 - 14:19:28 PST)
- David A Case (Thu Nov 17 2011 - 10:26:51 PST)
[AMBER-Developers] Amber on Live-CD?
- Jason Swails (Tue Nov 29 2011 - 13:55:08 PST)
- Ross Walker (Tue Nov 29 2011 - 13:23:44 PST)
- Jason Swails (Tue Nov 29 2011 - 13:12:47 PST)
- Ross Walker (Tue Nov 29 2011 - 12:45:59 PST)
- istvan.kolossvary.hu (Tue Nov 29 2011 - 12:03:41 PST)
- Gustavo Seabra (Tue Nov 29 2011 - 11:44:28 PST)
- Gustavo Seabra (Tue Nov 29 2011 - 11:40:58 PST)
- Mark Williamson (Tue Nov 29 2011 - 11:27:47 PST)
- Jason Swails (Tue Nov 29 2011 - 10:40:17 PST)
- Adrian Roitberg (Tue Nov 29 2011 - 10:28:34 PST)
- Gustavo Seabra (Tue Nov 29 2011 - 10:26:11 PST)
[AMBER-Developers] Amber Wiki
- case (Thu Nov 10 2011 - 06:35:50 PST)
[AMBER-Developers] Amber-developers email ground rules, yet again
- case (Sat Nov 12 2011 - 19:27:01 PST)
[AMBER-Developers] AMBER11 bugfix #19 is broken
- Jason Swails (Sun Nov 27 2011 - 13:53:30 PST)
- case (Sun Nov 27 2011 - 09:58:39 PST)
- Jason Swails (Sat Nov 26 2011 - 21:24:31 PST)
- Ross Walker (Sat Nov 26 2011 - 18:35:46 PST)
- Jason Swails (Thu Nov 24 2011 - 07:41:14 PST)
- Jason Swails (Thu Nov 24 2011 - 07:37:52 PST)
- Mark Williamson (Thu Nov 24 2011 - 06:37:36 PST)
- David A Case (Wed Nov 23 2011 - 11:50:07 PST)
- David A Case (Wed Nov 23 2011 - 11:38:53 PST)
- Jason Swails (Wed Nov 23 2011 - 09:19:26 PST)
- Jason Swails (Wed Nov 23 2011 - 07:50:18 PST)
- David A Case (Wed Nov 23 2011 - 07:41:11 PST)
- Jason Swails (Wed Nov 23 2011 - 07:24:27 PST)
- Ross Walker (Wed Nov 23 2011 - 07:02:25 PST)
- Ross Walker (Wed Nov 23 2011 - 06:55:53 PST)
- Ross Walker (Wed Nov 23 2011 - 06:48:27 PST)
- David A Case (Wed Nov 23 2011 - 06:31:11 PST)
- Mark Williamson (Wed Nov 23 2011 - 05:59:41 PST)
[AMBER-Developers] Amber12 as a complete package
- Timothy Giese (Sat Nov 05 2011 - 05:49:10 PDT)
- Scott Brozell (Fri Nov 04 2011 - 17:07:11 PDT)
- Ross Walker (Fri Nov 04 2011 - 13:17:54 PDT)
- David A Case (Fri Nov 04 2011 - 06:54:02 PDT)
- Ross Walker (Thu Nov 03 2011 - 20:33:57 PDT)
- David A Case (Thu Nov 03 2011 - 19:27:49 PDT)
[AMBER-Developers] Ascii Restart Files: precision on velocities
- case (Mon Nov 07 2011 - 18:10:20 PST)
- dcerutti.rci.rutgers.edu (Mon Nov 07 2011 - 14:45:20 PST)
- Jason Swails (Mon Nov 07 2011 - 14:33:21 PST)
- dcerutti.rci.rutgers.edu (Mon Nov 07 2011 - 14:24:46 PST)
[AMBER-Developers] AT Manual feedback request
- Yong Duan (Sun Nov 27 2011 - 15:23:00 PST)
- B. Lachele Foley (Sun Nov 27 2011 - 12:43:59 PST)
- Yong Duan (Sat Nov 26 2011 - 23:57:43 PST)
- Jason Swails (Sat Nov 26 2011 - 21:06:48 PST)
- B. Lachele Foley (Sat Nov 26 2011 - 20:43:54 PST)
- Yong Duan (Sat Nov 26 2011 - 19:44:29 PST)
- case (Sat Nov 26 2011 - 09:02:13 PST)
- B. Lachele Foley (Wed Nov 23 2011 - 12:18:50 PST)
[AMBER-Developers] bug fix protocol
- Jason Swails (Wed Nov 23 2011 - 15:11:45 PST)
- Jason Swails (Sat Nov 05 2011 - 15:28:02 PDT)
- Jason Swails (Fri Nov 04 2011 - 23:54:52 PDT)
- Scott Brozell (Fri Nov 04 2011 - 22:54:57 PDT)
- Ross Walker (Fri Nov 04 2011 - 22:42:29 PDT)
- Jason Swails (Fri Nov 04 2011 - 22:26:38 PDT)
[AMBER-Developers] bugfix update script
- Jason Swails (Mon Nov 07 2011 - 22:38:18 PST)
- Ross Walker (Mon Nov 07 2011 - 22:23:37 PST)
- Jason Swails (Mon Nov 07 2011 - 22:12:48 PST)
[AMBER-Developers] Chirality routines in tleap; do they do the correct thing with coordination numbers >4
- B. Lachele Foley (Fri Nov 18 2011 - 15:19:46 PST)
- B. Lachele Foley (Fri Nov 18 2011 - 08:00:31 PST)
- David A Case (Fri Nov 18 2011 - 06:20:06 PST)
- Josh Berryman (Fri Nov 18 2011 - 06:00:07 PST)
- David A Case (Fri Nov 18 2011 - 05:18:01 PST)
- Josh Berryman (Fri Nov 18 2011 - 00:47:38 PST)
- B. Lachele Foley (Thu Nov 17 2011 - 08:35:52 PST)
- Mark Williamson (Thu Nov 17 2011 - 08:13:24 PST)
[AMBER-Developers] Code freeze for Amber 12 coming on Dec. 24
- case (Thu Nov 24 2011 - 11:31:37 PST)
[AMBER-Developers] Comments from Romain Wolf about tleap
- David A Case (Thu Nov 03 2011 - 07:38:47 PDT)
[AMBER-Developers] Cruise Control
- Ross Walker (Sat Nov 12 2011 - 15:25:15 PST)
[AMBER-Developers] Cruise Control and Build Failures
- Jason Swails (Sun Nov 06 2011 - 23:25:02 PST)
- Ross Walker (Sun Nov 06 2011 - 21:00:32 PST)
[AMBER-Developers] Experiences with sleap
- Yong Duan (Mon Nov 07 2011 - 17:31:47 PST)
- Wei Zhang (Mon Nov 07 2011 - 16:41:29 PST)
- Yong Duan (Mon Nov 07 2011 - 13:48:08 PST)
- Jodi Ann Hadden (Mon Nov 07 2011 - 12:49:37 PST)
- Ben Roberts (Mon Nov 07 2011 - 12:17:38 PST)
- David A Case (Mon Nov 07 2011 - 11:54:26 PST)
- Ben Roberts (Mon Nov 07 2011 - 11:36:27 PST)
- Yong Duan (Sun Nov 06 2011 - 13:21:17 PST)
- Scott Brozell (Sun Nov 06 2011 - 10:38:11 PST)
- InSuk Joung (Sun Nov 06 2011 - 07:39:50 PST)
- Yong Duan (Sat Nov 05 2011 - 13:07:41 PDT)
- Yong Duan (Sat Nov 05 2011 - 12:47:22 PDT)
- David Case (Sat Nov 05 2011 - 10:39:44 PDT)
- David Case (Sat Nov 05 2011 - 10:25:46 PDT)
- Ross Walker (Sat Nov 05 2011 - 09:37:06 PDT)
- Justin MacCallum (Sat Nov 05 2011 - 09:07:22 PDT)
- Justin MacCallum (Sat Nov 05 2011 - 08:18:46 PDT)
- case (Sat Nov 05 2011 - 06:58:43 PDT)
- Ross Walker (Fri Nov 04 2011 - 22:37:20 PDT)
- Yong Duan (Fri Nov 04 2011 - 20:57:23 PDT)
- Wei Zhang (Fri Nov 04 2011 - 19:17:32 PDT)
- Wei Zhang (Fri Nov 04 2011 - 18:57:06 PDT)
- Jodi Ann Hadden (Fri Nov 04 2011 - 18:56:44 PDT)
- Scott Brozell (Fri Nov 04 2011 - 17:47:10 PDT)
- Jodi Ann Hadden (Fri Nov 04 2011 - 17:09:01 PDT)
- Ross Walker (Fri Nov 04 2011 - 16:43:48 PDT)
- Jason Swails (Fri Nov 04 2011 - 15:52:57 PDT)
- Eric Pettersen (Fri Nov 04 2011 - 13:19:42 PDT)
- Jodi Ann Hadden (Fri Nov 04 2011 - 12:36:45 PDT)
- case (Thu Nov 03 2011 - 20:16:19 PDT)
- Ross Walker (Thu Nov 03 2011 - 20:14:24 PDT)
- Daniel Roe (Thu Nov 03 2011 - 19:25:13 PDT)
- dcerutti.rci.rutgers.edu (Thu Nov 03 2011 - 18:58:58 PDT)
- Jason Swails (Thu Nov 03 2011 - 17:31:33 PDT)
- Ben Roberts (Thu Nov 03 2011 - 15:07:02 PDT)
- Eric Pettersen (Thu Nov 03 2011 - 14:49:06 PDT)
- Ross Walker (Thu Nov 03 2011 - 14:45:44 PDT)
- Yong Duan (Thu Nov 03 2011 - 12:43:32 PDT)
- Yong Duan (Thu Nov 03 2011 - 12:21:34 PDT)
- Wei Zhang (Thu Nov 03 2011 - 11:28:33 PDT)
- Ben Roberts (Thu Nov 03 2011 - 08:02:37 PDT)
- Wei Zhang (Wed Nov 02 2011 - 20:30:09 PDT)
- case (Wed Nov 02 2011 - 18:32:10 PDT)
- Daniel Roe (Wed Nov 02 2011 - 13:36:31 PDT)
- Jason Swails (Wed Nov 02 2011 - 12:51:14 PDT)
- Mark Williamson (Wed Nov 02 2011 - 09:35:27 PDT)
[AMBER-Developers] ff11 branch, gleap
- Yong Duan (Sun Nov 27 2011 - 15:16:04 PST)
- Jason Swails (Sun Nov 27 2011 - 12:59:29 PST)
- Yong Duan (Sun Nov 27 2011 - 10:57:18 PST)
[AMBER-Developers] ff11pol sample leap files
- Yong Duan (Sat Nov 12 2011 - 19:16:40 PST)
- Jason Swails (Sat Nov 12 2011 - 09:54:53 PST)
- Yong Duan (Sat Nov 12 2011 - 08:55:43 PST)
- case (Sat Nov 12 2011 - 07:45:32 PST)
[AMBER-Developers] git commit
- Jason Swails (Thu Nov 03 2011 - 22:07:02 PDT)
- Yong Duan (Thu Nov 03 2011 - 21:46:18 PDT)
- Jason Swails (Thu Nov 03 2011 - 20:18:45 PDT)
[AMBER-Developers] Ground rules for discussion of Amber12
- Ken Merz (Sat Nov 05 2011 - 09:00:57 PDT)
- Jason Swails (Fri Nov 04 2011 - 23:04:22 PDT)
- Scott Brozell (Fri Nov 04 2011 - 22:38:33 PDT)
- Ross Walker (Fri Nov 04 2011 - 22:35:44 PDT)
- Thomas Cheatham (Fri Nov 04 2011 - 20:42:35 PDT)
- case (Fri Nov 04 2011 - 20:28:03 PDT)
[AMBER-Developers] Ground rules for posting to the amber-developers mailing lists
- Yong Duan (Sat Nov 12 2011 - 20:47:10 PST)
- case (Sat Nov 12 2011 - 14:57:11 PST)
[AMBER-Developers] How is this a race error?
- dcerutti.rci.rutgers.edu (Wed Nov 16 2011 - 09:39:00 PST)
- dcerutti.rci.rutgers.edu (Mon Nov 14 2011 - 23:22:39 PST)
- dcerutti.rci.rutgers.edu (Mon Nov 14 2011 - 21:07:30 PST)
[AMBER-Developers] Linking Amber and AmberTools together--GPL issues?
- Timothy Giese (Sat Nov 05 2011 - 09:39:47 PDT)
- Timothy Giese (Sat Nov 05 2011 - 09:30:11 PDT)
- Ross Walker (Sat Nov 05 2011 - 09:28:00 PDT)
- Timothy Giese (Sat Nov 05 2011 - 08:30:46 PDT)
- Timothy Giese (Sat Nov 05 2011 - 08:01:21 PDT)
- case (Sat Nov 05 2011 - 06:56:49 PDT)
[AMBER-Developers] Make -j4.
- Tyler Luchko (Sat Nov 12 2011 - 19:32:45 PST)
- Ross Walker (Sat Nov 12 2011 - 15:15:09 PST)
[AMBER-Developers] new syntax for FLIBS variable in config.h
- David A. Case (Fri Nov 18 2011 - 10:15:07 PST)
- Daniel Roe (Fri Nov 18 2011 - 06:39:25 PST)
- David A Case (Fri Nov 18 2011 - 05:59:59 PST)
[AMBER-Developers] possible fix for NCSU problems with old gfortrans
- case (Mon Nov 07 2011 - 18:07:26 PST)
[AMBER-Developers] postdoc position in Amber development/drug discovery
- Daniel Roe (Fri Nov 11 2011 - 08:32:22 PST)
- Daniel Roe (Fri Nov 11 2011 - 08:31:38 PST)
[AMBER-Developers] Proposal for a new git branch
- David A Case (Wed Nov 16 2011 - 05:46:22 PST)
- Scott Brozell (Wed Nov 16 2011 - 00:51:22 PST)
- Jason Swails (Sat Nov 12 2011 - 14:49:43 PST)
- Jason Swails (Sat Nov 12 2011 - 14:23:46 PST)
- Tyler Luchko (Sat Nov 12 2011 - 14:26:03 PST)
- Ross Walker (Sat Nov 12 2011 - 14:19:05 PST)
- Ross Walker (Sat Nov 12 2011 - 13:52:26 PST)
- Ross Walker (Sat Nov 12 2011 - 13:51:00 PST)
- case (Sat Nov 12 2011 - 06:59:28 PST)
- Scott Brozell (Sat Nov 12 2011 - 00:27:56 PST)
- Jason Swails (Fri Nov 11 2011 - 21:19:19 PST)
- case (Fri Nov 11 2011 - 19:16:14 PST)
[AMBER-Developers] Ptraj actions / analyze routines implemented in Cpptraj
- case (Wed Nov 09 2011 - 19:35:11 PST)
- Daniel Roe (Wed Nov 09 2011 - 10:43:23 PST)
[AMBER-Developers] Ross' comments about mdgx
- case (Thu Nov 03 2011 - 19:40:33 PDT)
[AMBER-Developers] significant recent tleap changes
- Ross Walker (Sat Nov 12 2011 - 14:22:53 PST)
- Ross Walker (Sat Nov 12 2011 - 14:21:07 PST)
- Ross Walker (Sat Nov 12 2011 - 14:09:48 PST)
- Jason Swails (Fri Nov 11 2011 - 21:51:55 PST)
- Yong Duan (Fri Nov 11 2011 - 20:42:07 PST)
- Jason Swails (Fri Nov 11 2011 - 19:25:40 PST)
- Yong Duan (Fri Nov 11 2011 - 19:22:26 PST)
- Yong Duan (Fri Nov 11 2011 - 19:16:20 PST)
- Ross Walker (Fri Nov 11 2011 - 15:55:27 PST)
- Ross Walker (Fri Nov 11 2011 - 15:49:27 PST)
- Yong Duan (Fri Nov 11 2011 - 14:15:12 PST)
- David A Case (Fri Nov 11 2011 - 13:18:14 PST)
- B. Lachele Foley (Fri Nov 11 2011 - 12:53:46 PST)
- Jason Swails (Fri Nov 11 2011 - 12:46:40 PST)
- B. Lachele Foley (Fri Nov 11 2011 - 12:34:26 PST)
- Jason Swails (Fri Nov 11 2011 - 11:54:23 PST)
[AMBER-Developers] some thoughts about sander and Amber12
- Yong Duan (Wed Nov 30 2011 - 20:05:53 PST)
- Jason Swails (Wed Nov 30 2011 - 15:23:39 PST)
- Ross Walker (Wed Nov 30 2011 - 09:42:07 PST)
- steinbrt.rci.rutgers.edu (Wed Nov 30 2011 - 08:09:20 PST)
- David A Case (Wed Nov 30 2011 - 05:34:32 PST)
[AMBER-Developers] test suite
- Yong Duan (Tue Nov 08 2011 - 14:00:50 PST)
[AMBER-Developers] Testing mess...
- Ross Walker (Fri Nov 11 2011 - 15:57:31 PST)
[AMBER-Developers] Topology file readers
- dcerutti.rci.rutgers.edu (Tue Nov 29 2011 - 14:46:38 PST)
- Jason Swails (Tue Nov 29 2011 - 13:53:47 PST)
- Ross Walker (Tue Nov 29 2011 - 13:52:07 PST)
- dcerutti.rci.rutgers.edu (Tue Nov 29 2011 - 11:30:41 PST)
[AMBER-Developers] Tzy-hwa K Tzeng is out of the office.
- Tzy-hwa K Tzeng (Fri Nov 18 2011 - 10:13:14 PST)
[AMBER-Developers] Versioning
- Jason Swails (Thu Nov 03 2011 - 12:37:17 PDT)
- Ross Walker (Thu Nov 03 2011 - 11:22:11 PDT)

Amber Developers Archive Nov 2011 by subject