Re: [AMBER-Developers] new syntax for FLIBS variable in config.h

From: Daniel Roe <>
Date: Fri, 18 Nov 2011 09:39:25 -0500


On Fri, Nov 18, 2011 at 8:59 AM, David A Case <> wrote:
> c. The stand-alone Makefile for cpptraj may be broken by this change.  I
>   looked at fixing it, but it looked broken already anyway, and I figured
>   Dan would be in the best position to make any changes.  I'm kind of
>   inclined to avoid distributing this, since users are likely to try
>   something like "cd cpptraj; make install" and have it fail.

No worries, the stand-alone Makefile for cpptraj is completely
independent and uses its own config.h generated by
$AMBERHOME/AmberTools/src/cpptraj/configure, so it doesn't matter what
changes you make to $AMBERHOME/AmberTools/src/configure. I can change
the make target naming scheme so that 'make install' is the AmberTools
install and something like 'make standalone' is the standalone target
if you would prefer that. I think you should consider distributing
this; it is intended for advanced users who might want to enable some
of the more powerful but still not completely tested features of
cpptraj, like openmp support. It's not essential however.


Daniel R. Roe, PhD
Postdoctoral Associate
BioMaPS Institute, Rutgers University
610 Taylor Road
Piscataway, NJ   08854
AMBER-Developers mailing list
Received on Fri Nov 18 2011 - 07:00:02 PST
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