Amber Developers Archive Sep 2009: by subject

[AMBER-Developers] [roitberg.qtp.ufl.edu: amber wiki]
- case (Mon Aug 31 2009 - 18:14:12 PDT)
[AMBER-Developers] Adding mdwrit to minimisation?
- Daniel Roe (Fri Sep 11 2009 - 11:10:14 PDT)
- Ben Roberts (Fri Sep 11 2009 - 10:08:54 PDT)
- Daniel Roe (Thu Sep 10 2009 - 08:33:14 PDT)
[AMBER-Developers] Amber on Mac (Snow Leopard)
- MengJuei Hsieh (Tue Sep 22 2009 - 18:41:01 PDT)
- Volodymyr Babin (Wed Sep 16 2009 - 19:10:34 PDT)
- Tom Joseph (Wed Sep 16 2009 - 18:58:35 PDT)
- case (Wed Sep 16 2009 - 18:56:55 PDT)
- Tom Joseph (Wed Sep 16 2009 - 18:53:22 PDT)
- Jason Swails (Wed Sep 16 2009 - 15:57:20 PDT)
[AMBER-Developers] Amber11 Snow Leopard compilation and testing notes on Wiki
- Ben Roberts (Wed Sep 30 2009 - 13:31:33 PDT)
[AMBER-Developers] AT parallel
- Lachele Foley (Thu Sep 03 2009 - 13:36:19 PDT)
- case (Thu Sep 03 2009 - 12:31:43 PDT)
- Lachele Foley (Thu Sep 03 2009 - 12:13:21 PDT)
[AMBER-Developers] bug numvec.hpp ?
- Scott Brozell (Thu Sep 24 2009 - 10:27:17 PDT)
- Scott Brozell (Thu Sep 24 2009 - 09:57:45 PDT)
- Andreas Svrcek-Seiler (Thu Sep 24 2009 - 08:39:17 PDT)
[AMBER-Developers] C form of AMBER's FORTRAN subroutine nxtsec
- Mark Williamson (Wed Sep 23 2009 - 12:00:51 PDT)
- case (Wed Sep 23 2009 - 06:42:05 PDT)
- Lachele Foley (Mon Sep 21 2009 - 14:34:10 PDT)
- Mark Williamson (Mon Sep 21 2009 - 13:51:01 PDT)
[AMBER-Developers] comments on how different versions of MKL are handled
- case (Wed Sep 09 2009 - 08:47:53 PDT)
[AMBER-Developers] Compiling amber in parallel: config.h
- Jason Swails (Thu Sep 10 2009 - 07:56:11 PDT)
- case (Thu Sep 10 2009 - 04:58:01 PDT)
- Jason Swails (Wed Sep 09 2009 - 19:14:42 PDT)
[AMBER-Developers] depend files
- case (Fri Sep 11 2009 - 07:48:18 PDT)
- Ben Roberts (Fri Sep 11 2009 - 07:29:06 PDT)
[AMBER-Developers] First release candidate for AmberTools 1.3
- Ray Luo (Fri Sep 18 2009 - 20:08:32 PDT)
- case (Fri Sep 18 2009 - 19:56:08 PDT)
[AMBER-Developers] In which serial Amber 11 is compiled on a Mac running Snow Leopard
- Gustavo Seabra (Wed Sep 30 2009 - 09:03:13 PDT)
- Ben Roberts (Wed Sep 30 2009 - 08:58:52 PDT)
- Gustavo Seabra (Wed Sep 30 2009 - 08:22:39 PDT)
- Ben Roberts (Tue Sep 29 2009 - 14:46:01 PDT)
[AMBER-Developers] Makefile_at problems
- case (Wed Sep 09 2009 - 18:28:16 PDT)
- Jason Swails (Wed Sep 09 2009 - 17:07:22 PDT)
[AMBER-Developers] missing log file from previous email
- case (Sun Sep 27 2009 - 12:05:56 PDT)
[AMBER-Developers] more changes to the configuration scripts in amber11
- case (Wed Sep 02 2009 - 08:27:49 PDT)
[AMBER-Developers] more MKL questions
- case (Wed Sep 09 2009 - 09:51:35 PDT)
[AMBER-Developers] moving towards a single configure script
- case (Tue Sep 01 2009 - 19:39:03 PDT)
[AMBER-Developers] need for mmpbsa test set
- Ken Merz (Mon Sep 14 2009 - 11:52:17 PDT)
- Adrian Roitberg (Mon Sep 14 2009 - 11:30:29 PDT)
[AMBER-Developers] New error in GB N-R and normal mode test
- Jason Swails (Tue Sep 29 2009 - 10:47:28 PDT)
- Ben Roberts (Tue Sep 29 2009 - 10:39:43 PDT)
[AMBER-Developers] Parallel Ptraj
- case (Fri Sep 04 2009 - 15:07:20 PDT)
- Ross Walker (Fri Sep 04 2009 - 12:40:59 PDT)
- case (Fri Sep 04 2009 - 11:58:03 PDT)
- Ross Walker (Fri Sep 04 2009 - 11:03:46 PDT)
[AMBER-Developers] Problems with parallel compiling...
- case (Sat Sep 19 2009 - 17:07:39 PDT)
- steinbrt.rci.rutgers.edu (Fri Sep 18 2009 - 02:03:31 PDT)
- case (Wed Sep 16 2009 - 06:47:17 PDT)
- steinbrt.rci.rutgers.edu (Wed Sep 16 2009 - 06:17:14 PDT)
- case (Wed Sep 16 2009 - 04:45:36 PDT)
- steinbrt.rci.rutgers.edu (Tue Sep 15 2009 - 07:04:12 PDT)
[AMBER-Developers] Problems with parallel compiling... Resolved
- Tom Joseph (Thu Sep 17 2009 - 07:59:01 PDT)
- case (Thu Sep 17 2009 - 05:55:53 PDT)
- steinbrt.rci.rutgers.edu (Thu Sep 17 2009 - 04:50:02 PDT)
[AMBER-Developers] Problems with parallel compiling... update
- Volodymyr Babin (Tue Sep 15 2009 - 09:10:55 PDT)
- steinbrt.rci.rutgers.edu (Tue Sep 15 2009 - 08:05:28 PDT)
- Volodymyr Babin (Tue Sep 15 2009 - 07:52:49 PDT)
- steinbrt.rci.rutgers.edu (Tue Sep 15 2009 - 07:24:11 PDT)
[AMBER-Developers] Provisional Support for AMBER 10 PMEMD on NVIDIA GPUs
- Ken Merz (Fri Sep 04 2009 - 11:16:59 PDT)
- Carlos Simmerling (Fri Sep 04 2009 - 09:38:31 PDT)
- Ross Walker (Fri Sep 04 2009 - 09:35:13 PDT)
[AMBER-Developers] ptraj.MPI compiling issues
- Jason Swails (Thu Sep 10 2009 - 11:01:24 PDT)
- case (Thu Sep 10 2009 - 05:28:45 PDT)
- Jason Swails (Wed Sep 09 2009 - 19:35:19 PDT)
[AMBER-Developers] Question about cleaning
- case (Wed Sep 30 2009 - 08:05:13 PDT)
- Ben Roberts (Wed Sep 30 2009 - 06:36:22 PDT)
- case (Wed Sep 30 2009 - 05:11:07 PDT)
- Ben Roberts (Tue Sep 29 2009 - 13:00:57 PDT)
- Scott Brozell (Tue Sep 15 2009 - 14:50:10 PDT)
[AMBER-Developers] Request for comments on Fortran vs. C versions of blas, lapack, etc.
- Scott Brozell (Thu Sep 17 2009 - 14:32:12 PDT)
- case (Thu Sep 17 2009 - 13:22:49 PDT)
- Scott Brozell (Thu Sep 17 2009 - 12:23:20 PDT)
- Eric Pettersen (Thu Sep 17 2009 - 10:34:47 PDT)
- case (Thu Sep 17 2009 - 10:02:18 PDT)
- Scott Brozell (Thu Sep 17 2009 - 09:54:00 PDT)
- Volodymyr Babin (Thu Sep 17 2009 - 06:43:18 PDT)
- case (Thu Sep 17 2009 - 05:05:06 PDT)
- case (Thu Sep 17 2009 - 04:50:46 PDT)
- Scott Brozell (Thu Sep 17 2009 - 00:43:15 PDT)
- Volodymyr Babin (Wed Sep 16 2009 - 19:56:02 PDT)
- case (Wed Sep 16 2009 - 19:17:13 PDT)
[AMBER-Developers] sander error: formatted I/O to unit open for unformatted transfers
- Ben Roberts (Fri Sep 04 2009 - 07:09:19 PDT)
- Andreas Goetz (Thu Sep 03 2009 - 18:42:11 PDT)
[AMBER-Developers] Second release candidate for AmberTools 1.3
- Volodymyr Babin (Fri Sep 25 2009 - 11:04:12 PDT)
- Scott Brozell (Fri Sep 25 2009 - 10:51:50 PDT)
- Volodymyr Babin (Fri Sep 25 2009 - 09:57:13 PDT)
- case (Fri Sep 25 2009 - 08:25:14 PDT)
- Volodymyr Babin (Thu Sep 24 2009 - 20:44:06 PDT)
- case (Thu Sep 24 2009 - 15:28:21 PDT)
[AMBER-Developers] Second release candidate for AmberTools 1.3; numvec
- Volodymyr Babin (Mon Sep 28 2009 - 07:49:01 PDT)
- case (Mon Sep 28 2009 - 06:56:02 PDT)
- Wei Zhang (Sun Sep 27 2009 - 19:40:42 PDT)
- Volodymyr Babin (Sun Sep 27 2009 - 12:53:14 PDT)
- case (Sun Sep 27 2009 - 12:03:32 PDT)
- Volodymyr Babin (Sun Sep 27 2009 - 09:15:16 PDT)
- Volodymyr Babin (Sat Sep 26 2009 - 08:00:55 PDT)
- case (Fri Sep 25 2009 - 14:48:01 PDT)
- Volodymyr Babin (Fri Sep 25 2009 - 12:10:58 PDT)
- Volodymyr Babin (Fri Sep 25 2009 - 11:47:16 PDT)
- Scott Brozell (Fri Sep 25 2009 - 11:25:27 PDT)
[AMBER-Developers] sqm requires manual "make depend"
- case (Fri Sep 04 2009 - 07:03:04 PDT)
- Andreas Goetz (Thu Sep 03 2009 - 18:30:39 PDT)
[AMBER-Developers] yet more configure changes in CVS
- case (Fri Sep 04 2009 - 15:16:32 PDT)
[Fwd: [AMBER] AmberTools 1.3 / CHAMBER]
- case (Mon Sep 14 2009 - 05:35:54 PDT)
Amber on Mac (Snow Leopard))
- Volodymyr Babin (Sun Sep 27 2009 - 09:19:07 PDT)
- Jason Swails (Sun Sep 27 2009 - 09:13:26 PDT)
- Tom Joseph (Sun Sep 27 2009 - 08:59:49 PDT)
- Tom Joseph (Sun Sep 27 2009 - 08:51:01 PDT)
- Volodymyr Babin (Sat Sep 26 2009 - 14:46:10 PDT)
- Jason Swails (Sat Sep 26 2009 - 13:49:05 PDT)
- case (Sat Sep 26 2009 - 11:32:44 PDT)
- MengJuei Hsieh (Fri Sep 25 2009 - 13:25:44 PDT)

Amber Developers Archive Sep 2009 by subject