2009/9/17 case <case.biomaps.rutgers.edu>:
> See comment above; but I have not yet been able to get lam + netcdf + pnetcdf
> to work on Mac OSX. It does work for me on intel/Linux.
I got these to compile on Snow Leopard (64-bit CPU, 32-bit kernel) by
making sure -m64 was passed to the compilers, and for lam, adding
--enable-shared=yes --without-memory-manager to the configure flags.
The latter flag avoids some linker issue that I don't understand, but
in theory prevents LAM from working with IB or Myrinet.
To actually run AMBER's MPI binaries, the shell variable
DYLD_LIBRARY_PATH must specify $AMBERHOME/lib since Snow Leopard
includes a non-Fortran OpenMPI in /usr/lib which would otherwise take
precedence.
--Tom
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Received on Thu Sep 17 2009 - 08:00:02 PDT
