Amber Developers Archive Feb 2014 by thread
127 messages
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Starting
Sat Feb 01 2014 - 08:30:02 PST,
Ending
Wed Feb 26 2014 - 12:00:03 PST
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Re: [AMBER-Developers] [AMBER] ATOMIC NUMBER section in prmtop file - Sustiva example
David A Case
(Sat Feb 01 2014 - 08:27:25 PST)
Re: [AMBER-Developers] [AMBER] ATOMIC NUMBER section in prmtop file - Sustiva example
James Maier
(Sat Feb 01 2014 - 20:57:46 PST)
Re: [AMBER-Developers] [AMBER] ATOMIC NUMBER section in prmtop file - Sustiva example
Jason Swails
(Tue Feb 04 2014 - 09:01:27 PST)
Re: [AMBER-Developers] [AMBER] ATOMIC NUMBER section in prmtop file - Sustiva example
James Maier
(Sat Feb 08 2014 - 20:05:18 PST)
Re: [AMBER-Developers] [AMBER] ATOMIC NUMBER section in prmtop file - Sustiva example
Jason Swails
(Mon Feb 10 2014 - 11:42:59 PST)
[AMBER-Developers] two weeks!
David A Case
(Mon Feb 03 2014 - 17:54:57 PST)
[AMBER-Developers] Parallel Test failures with CUDA 5.5
Daniel Roe
(Wed Feb 05 2014 - 14:33:34 PST)
Re: [AMBER-Developers] Parallel Test failures with CUDA 5.5
Ross Walker
(Wed Feb 05 2014 - 16:02:43 PST)
Re: [AMBER-Developers] Parallel Test failures with CUDA 5.5
Ross Walker
(Wed Feb 05 2014 - 18:08:20 PST)
Re: [AMBER-Developers] Parallel Test failures with CUDA 5.5
Daniel Roe
(Wed Feb 05 2014 - 20:46:09 PST)
Re: [AMBER-Developers] Parallel Test failures with CUDA 5.5
David A Case
(Thu Feb 06 2014 - 04:27:15 PST)
Re: [AMBER-Developers] Parallel Test failures with CUDA 5.5
Ross Walker
(Thu Feb 06 2014 - 08:38:16 PST)
Re: [AMBER-Developers] Parallel Test failures with CUDA 5.5
Daniel Roe
(Thu Feb 06 2014 - 09:42:30 PST)
Re: [AMBER-Developers] Parallel Test failures with CUDA 5.5
Daniel Roe
(Thu Feb 06 2014 - 16:19:20 PST)
[AMBER-Developers] Fwd: [GIT] git repository for AMBER: sander/rism: reordered linking for MKL and FFTW3 libraries
Daniel Roe
(Fri Feb 07 2014 - 13:56:29 PST)
[AMBER-Developers] Cygwin + xleap issue
Ilyas Yildirim
(Sun Feb 09 2014 - 23:09:04 PST)
Re: [AMBER-Developers] Cygwin + xleap issue
David A Case
(Mon Feb 10 2014 - 04:47:15 PST)
[AMBER-Developers] one week until code freeze
David A Case
(Mon Feb 10 2014 - 06:02:45 PST)
Re: [AMBER-Developers] one week until code freeze
Ray Luo, Ph.D.
(Mon Feb 10 2014 - 15:58:27 PST)
Re: [AMBER-Developers] one week until code freeze
Ray Luo, Ph.D.
(Mon Feb 10 2014 - 18:18:30 PST)
Re: [AMBER-Developers] one week until code freeze
Jason Swails
(Tue Feb 11 2014 - 05:32:18 PST)
Re: [AMBER-Developers] one week until code freeze
Josh Berryman
(Tue Feb 11 2014 - 06:51:50 PST)
Re: [AMBER-Developers] one week until code freeze
Jason Swails
(Tue Feb 11 2014 - 08:19:52 PST)
Re: [AMBER-Developers] one week until code freeze
Ray Luo, Ph.D.
(Tue Feb 11 2014 - 12:39:28 PST)
Re: [AMBER-Developers] one week until code freeze
Ray Luo, Ph.D.
(Tue Feb 11 2014 - 15:05:35 PST)
Re: [AMBER-Developers] one week until code freeze
Ray Luo, Ph.D.
(Tue Feb 11 2014 - 17:17:50 PST)
Re: [AMBER-Developers] one week until code freeze
Ray Luo, Ph.D.
(Tue Feb 11 2014 - 09:45:04 PST)
Re: [AMBER-Developers] one week until code freeze
Jason Swails
(Tue Feb 11 2014 - 12:07:39 PST)
Re: [AMBER-Developers] one week until code freeze
Ray Luo, Ph.D.
(Tue Feb 11 2014 - 12:36:15 PST)
Re: [AMBER-Developers] one week until code freeze
Ray Luo, Ph.D.
(Tue Feb 11 2014 - 10:49:35 PST)
Re: [AMBER-Developers] one week until code freeze
Jason Swails
(Tue Feb 11 2014 - 11:59:00 PST)
Re: [AMBER-Developers] one week until code freeze
Romain M. Wolf
(Mon Feb 10 2014 - 17:37:26 PST)
Re: [AMBER-Developers] one week until code freeze
David A Case
(Tue Feb 11 2014 - 14:35:46 PST)
[AMBER-Developers] 12-6-4 LJ Commit.
Ross Walker
(Tue Feb 11 2014 - 14:05:00 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
Ross Walker
(Tue Feb 11 2014 - 14:12:56 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
Jason Swails
(Wed Feb 12 2014 - 07:49:54 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
Ross Walker
(Wed Feb 12 2014 - 09:16:34 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
Jason Swails
(Wed Feb 12 2014 - 09:48:28 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
Ross Walker
(Wed Feb 12 2014 - 10:04:12 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
Jason Swails
(Wed Feb 12 2014 - 10:52:01 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
David A Case
(Wed Feb 12 2014 - 13:32:16 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
Scott Le Grand
(Wed Feb 12 2014 - 14:13:00 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
Ross Walker
(Wed Feb 12 2014 - 14:35:50 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
Scott Le Grand
(Wed Feb 12 2014 - 14:46:28 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
Gerald Monard
(Wed Feb 12 2014 - 14:52:57 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
Jason Swails
(Wed Feb 12 2014 - 14:58:33 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
Ross Walker
(Wed Feb 12 2014 - 15:02:57 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
Gerald Monard
(Wed Feb 12 2014 - 15:15:31 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
Scott Le Grand
(Wed Feb 12 2014 - 15:18:21 PST)
[AMBER-Developers] New features in pmemd
David A Case
(Wed Feb 12 2014 - 18:46:15 PST)
Re: [AMBER-Developers] New features in pmemd
Jason Swails
(Wed Feb 12 2014 - 19:00:41 PST)
Re: [AMBER-Developers] New features in pmemd
Scott Le Grand
(Wed Feb 12 2014 - 19:23:37 PST)
Re: [AMBER-Developers] New features in pmemd
Josh Berryman
(Thu Feb 13 2014 - 00:25:44 PST)
Re: [AMBER-Developers] New features in pmemd
Ross Walker
(Thu Feb 13 2014 - 08:04:45 PST)
Re: [AMBER-Developers] New features in pmemd
Josh Berryman
(Fri Feb 14 2014 - 01:38:13 PST)
Re: [AMBER-Developers] New features in pmemd
Jason Swails
(Fri Feb 14 2014 - 03:01:12 PST)
Re: [AMBER-Developers] New features in pmemd
Scott Brozell
(Mon Feb 17 2014 - 20:42:13 PST)
Re: [AMBER-Developers] New features in pmemd
Duke, Robert E Jr
(Mon Feb 17 2014 - 21:19:42 PST)
Re: [AMBER-Developers] New features in pmemd
Ross Walker
(Mon Feb 17 2014 - 22:36:27 PST)
Re: [AMBER-Developers] New features in pmemd
Scott Brozell
(Tue Feb 18 2014 - 02:39:49 PST)
Re: [AMBER-Developers] New features in pmemd
Ross Walker
(Tue Feb 18 2014 - 08:32:15 PST)
Re: [AMBER-Developers] New features in pmemd
Scott Brozell
(Tue Feb 18 2014 - 14:47:48 PST)
Re: [AMBER-Developers] New features in pmemd
Ross Walker
(Mon Feb 17 2014 - 22:57:55 PST)
Re: [AMBER-Developers] New features in pmemd
Ross Walker
(Mon Feb 17 2014 - 22:22:08 PST)
Re: [AMBER-Developers] New features in pmemd
Scott Brozell
(Tue Feb 18 2014 - 02:27:26 PST)
Re: [AMBER-Developers] New features in pmemd
Scott Le Grand
(Tue Feb 18 2014 - 05:56:21 PST)
Re: [AMBER-Developers] New features in pmemd
Josh Berryman
(Tue Feb 18 2014 - 06:43:12 PST)
Re: [AMBER-Developers] New features in pmemd
Scott Le Grand
(Tue Feb 18 2014 - 06:59:55 PST)
Re: [AMBER-Developers] New features in pmemd
Josh Berryman
(Tue Feb 18 2014 - 07:48:58 PST)
Re: [AMBER-Developers] New features in pmemd
Ross Walker
(Tue Feb 18 2014 - 08:19:31 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
Gustavo Seabra
(Thu Feb 13 2014 - 04:16:52 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
Ross Walker
(Thu Feb 13 2014 - 08:05:31 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
Jason Swails
(Wed Feb 12 2014 - 15:03:40 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
Ross Walker
(Wed Feb 12 2014 - 15:08:57 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
David A Case
(Wed Feb 12 2014 - 18:19:37 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
Scott Le Grand
(Wed Feb 12 2014 - 18:26:24 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
Jason Swails
(Tue Feb 11 2014 - 14:19:24 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
Ross Walker
(Tue Feb 11 2014 - 14:47:26 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
Josh Berryman
(Tue Feb 11 2014 - 23:40:11 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
Josh Berryman
(Thu Feb 13 2014 - 01:35:39 PST)
Re: [AMBER-Developers] 12-6-4 LJ Commit.
Josh Berryman
(Thu Feb 13 2014 - 04:09:50 PST)
[AMBER-Developers] Outage for AMBER servers this weekend.
Ross Walker
(Tue Feb 11 2014 - 14:54:12 PST)
Re: [AMBER-Developers] Outage for AMBER servers this weekend.
Brent Krueger
(Tue Feb 11 2014 - 15:13:10 PST)
[AMBER-Developers] mdgx netcdf dependency
Josh Berryman
(Thu Feb 13 2014 - 04:49:27 PST)
Re: [AMBER-Developers] mdgx netcdf dependency
David A Case
(Thu Feb 13 2014 - 06:42:41 PST)
Re: [AMBER-Developers] mdgx netcdf dependency
Jason Swails
(Thu Feb 13 2014 - 07:24:26 PST)
Re: [AMBER-Developers] mdgx netcdf dependency
Josh Berryman
(Thu Feb 13 2014 - 23:53:20 PST)
Re: [AMBER-Developers] mdgx netcdf dependency
David A Case
(Fri Feb 14 2014 - 05:31:24 PST)
[AMBER-Developers] strange netcdf related mmpbsa test error
wmsmith.uci.edu
(Fri Feb 14 2014 - 15:29:50 PST)
Re: [AMBER-Developers] strange netcdf related mmpbsa test error
Daniel Roe
(Fri Feb 14 2014 - 15:59:36 PST)
Re: [AMBER-Developers] strange netcdf related mmpbsa test error
Jason Swails
(Fri Feb 14 2014 - 16:18:14 PST)
Re: [AMBER-Developers] strange netcdf related mmpbsa test error
wmsmith.uci.edu
(Fri Feb 14 2014 - 16:30:34 PST)
Re: [AMBER-Developers] strange netcdf related mmpbsa test error
David A Case
(Sat Feb 15 2014 - 06:28:17 PST)
Re: [AMBER-Developers] strange netcdf related mmpbsa test error
Jason Swails
(Sat Feb 15 2014 - 06:39:07 PST)
Re: [AMBER-Developers] mdgx netcdf dependency
Daniel Roe
(Fri Feb 14 2014 - 07:08:02 PST)
[AMBER-Developers] temporary git.ambermd.org "freeze" will happen on Feb. 18
David A Case
(Thu Feb 13 2014 - 13:02:09 PST)
[AMBER-Developers] Migrated mm_pbsa.pl from src to AmberTools/src
Holger Gohlke
(Fri Feb 14 2014 - 09:17:00 PST)
Re: [AMBER-Developers] Migrated mm_pbsa.pl from src to AmberTools/src
Ray Luo, Ph.D.
(Fri Feb 14 2014 - 09:26:30 PST)
[AMBER-Developers] Compiler backwards compatibility issue
Daniel Roe
(Tue Feb 18 2014 - 14:21:56 PST)
Re: [AMBER-Developers] Compiler backwards compatibility issue
Joe Kaus
(Tue Feb 18 2014 - 16:16:48 PST)
Re: [AMBER-Developers] Compiler backwards compatibility issue
Daniel Roe
(Tue Feb 18 2014 - 21:34:34 PST)
[AMBER-Developers] 1000th license for Amber12
David A Case
(Wed Feb 19 2014 - 05:06:13 PST)
[AMBER-Developers] Access changes at git.ambermd.org
David A Case
(Wed Feb 19 2014 - 05:14:16 PST)
[AMBER-Developers] sander to AmberTools
Jason Swails
(Thu Feb 20 2014 - 06:07:14 PST)
Re: [AMBER-Developers] sander to AmberTools
Jason Swails
(Thu Feb 20 2014 - 18:25:31 PST)
Re: [AMBER-Developers] sander to AmberTools
Andreas Goetz
(Tue Feb 25 2014 - 12:19:26 PST)
Re: [AMBER-Developers] sander to AmberTools
Jason Swails
(Tue Feb 25 2014 - 12:27:42 PST)
Re: [AMBER-Developers] sander to AmberTools
David A Case
(Tue Feb 25 2014 - 13:02:10 PST)
Re: [AMBER-Developers] sander to AmberTools
Andreas Goetz
(Tue Feb 25 2014 - 13:08:15 PST)
Re: [AMBER-Developers] sander to AmberTools
Jason Swails
(Tue Feb 25 2014 - 13:12:03 PST)
[AMBER-Developers] a quick note about the new code organization
David A Case
(Thu Feb 20 2014 - 19:28:10 PST)
[AMBER-Developers] new monoatomic_ions library
David A Case
(Fri Feb 21 2014 - 11:40:40 PST)
[AMBER-Developers] MD in Drug Discovery Symposium for the Fall ACS 2015 (Boston)
Guanglei Cui
(Tue Feb 25 2014 - 13:41:25 PST)
[AMBER-Developers] Write access to git.ambermd.org
David A Case
(Tue Feb 25 2014 - 18:00:59 PST)
Re: [AMBER-Developers] Write access to git.ambermd.org
Holger Gohlke
(Wed Feb 26 2014 - 00:04:18 PST)
Re: [AMBER-Developers] Write access to git.ambermd.org
David A Case
(Wed Feb 26 2014 - 04:42:00 PST)
[AMBER-Developers] Ions parameters in ff12SB
Gustavo Seabra
(Wed Feb 26 2014 - 05:06:01 PST)
Re: [AMBER-Developers] Ions parameters in ff12SB
Jason Swails
(Wed Feb 26 2014 - 05:14:29 PST)
Re: [AMBER-Developers] Ions parameters in ff12SB
Gustavo Seabra
(Wed Feb 26 2014 - 05:28:50 PST)
Re: [AMBER-Developers] Ions parameters in ff12SB
David A Case
(Wed Feb 26 2014 - 05:57:20 PST)
Re: [AMBER-Developers] Ions parameters in ff12SB
Gustavo Seabra
(Wed Feb 26 2014 - 06:27:44 PST)
Re: [AMBER-Developers] Ions parameters in ff12SB
David A Case
(Wed Feb 26 2014 - 06:56:31 PST)
Re: [AMBER-Developers] Ions parameters in ff12SB
Pawel Janowski
(Wed Feb 26 2014 - 08:21:55 PST)
Re: [AMBER-Developers] Ions parameters in ff12SB
Gustavo Seabra
(Wed Feb 26 2014 - 10:53:00 PST)
Re: [AMBER-Developers] Ions parameters in ff12SB
Jason Swails
(Wed Feb 26 2014 - 11:15:15 PST)
Re: [AMBER-Developers] Ions parameters in ff12SB
Gustavo Seabra
(Wed Feb 26 2014 - 11:31:36 PST)
[AMBER-Developers] be careful about DOS line endings
David A Case
(Wed Feb 26 2014 - 06:49:26 PST)
Last message date
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Wed Feb 26 2014 - 12:00:03 PST
Archived on
: Fri Apr 26 2024 - 05:02:41 PDT
127 messages
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