Amber Developers Archive Feb 2014: by author

Andreas Goetz
- Re: [AMBER-Developers] sander to AmberTools (Tue Feb 25 2014 - 13:08:15 PST)
- Re: [AMBER-Developers] sander to AmberTools (Tue Feb 25 2014 - 12:19:26 PST)
Brent Krueger
- Re: [AMBER-Developers] Outage for AMBER servers this weekend. (Tue Feb 11 2014 - 15:13:10 PST)
Daniel Roe
- Re: [AMBER-Developers] Compiler backwards compatibility issue (Tue Feb 18 2014 - 21:34:34 PST)
- [AMBER-Developers] Compiler backwards compatibility issue (Tue Feb 18 2014 - 14:21:56 PST)
- Re: [AMBER-Developers] strange netcdf related mmpbsa test error (Fri Feb 14 2014 - 15:59:36 PST)
- Re: [AMBER-Developers] mdgx netcdf dependency (Fri Feb 14 2014 - 07:08:02 PST)
- [AMBER-Developers] Fwd: [GIT] git repository for AMBER: sander/rism: reordered linking for MKL and FFTW3 libraries (Fri Feb 07 2014 - 13:56:29 PST)
- Re: [AMBER-Developers] Parallel Test failures with CUDA 5.5 (Thu Feb 06 2014 - 16:19:20 PST)
- Re: [AMBER-Developers] Parallel Test failures with CUDA 5.5 (Thu Feb 06 2014 - 09:42:30 PST)
- Re: [AMBER-Developers] Parallel Test failures with CUDA 5.5 (Wed Feb 05 2014 - 20:46:09 PST)
- [AMBER-Developers] Parallel Test failures with CUDA 5.5 (Wed Feb 05 2014 - 14:33:34 PST)
David A Case
- Re: [AMBER-Developers] Ions parameters in ff12SB (Wed Feb 26 2014 - 06:56:31 PST)
- [AMBER-Developers] be careful about DOS line endings (Wed Feb 26 2014 - 06:49:26 PST)
- Re: [AMBER-Developers] Ions parameters in ff12SB (Wed Feb 26 2014 - 05:57:20 PST)
- Re: [AMBER-Developers] Write access to git.ambermd.org (Wed Feb 26 2014 - 04:42:00 PST)
- [AMBER-Developers] Write access to git.ambermd.org (Tue Feb 25 2014 - 18:00:59 PST)
- Re: [AMBER-Developers] sander to AmberTools (Tue Feb 25 2014 - 13:02:10 PST)
- [AMBER-Developers] new monoatomic_ions library (Fri Feb 21 2014 - 11:40:40 PST)
- [AMBER-Developers] a quick note about the new code organization (Thu Feb 20 2014 - 19:28:10 PST)
- [AMBER-Developers] Access changes at git.ambermd.org (Wed Feb 19 2014 - 05:14:16 PST)
- [AMBER-Developers] 1000th license for Amber12 (Wed Feb 19 2014 - 05:06:13 PST)
- Re: [AMBER-Developers] strange netcdf related mmpbsa test error (Sat Feb 15 2014 - 06:28:17 PST)
- Re: [AMBER-Developers] mdgx netcdf dependency (Fri Feb 14 2014 - 05:31:24 PST)
- [AMBER-Developers] temporary git.ambermd.org "freeze" will happen on Feb. 18 (Thu Feb 13 2014 - 13:02:09 PST)
- Re: [AMBER-Developers] mdgx netcdf dependency (Thu Feb 13 2014 - 06:42:41 PST)
- [AMBER-Developers] New features in pmemd (Wed Feb 12 2014 - 18:46:15 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Wed Feb 12 2014 - 18:19:37 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Wed Feb 12 2014 - 13:32:16 PST)
- Re: [AMBER-Developers] one week until code freeze (Tue Feb 11 2014 - 14:35:46 PST)
- [AMBER-Developers] one week until code freeze (Mon Feb 10 2014 - 06:02:45 PST)
- Re: [AMBER-Developers] Cygwin + xleap issue (Mon Feb 10 2014 - 04:47:15 PST)
- Re: [AMBER-Developers] Parallel Test failures with CUDA 5.5 (Thu Feb 06 2014 - 04:27:15 PST)
- [AMBER-Developers] two weeks! (Mon Feb 03 2014 - 17:54:57 PST)
- Re: [AMBER-Developers] [AMBER] ATOMIC NUMBER section in prmtop file - Sustiva example (Sat Feb 01 2014 - 08:27:25 PST)
Duke, Robert E Jr
- Re: [AMBER-Developers] New features in pmemd (Mon Feb 17 2014 - 21:19:42 PST)
Gerald Monard
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Wed Feb 12 2014 - 15:15:31 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Wed Feb 12 2014 - 14:52:57 PST)
Guanglei Cui
- [AMBER-Developers] MD in Drug Discovery Symposium for the Fall ACS 2015 (Boston) (Tue Feb 25 2014 - 13:41:25 PST)
Gustavo Seabra
- Re: [AMBER-Developers] Ions parameters in ff12SB (Wed Feb 26 2014 - 11:31:36 PST)
- Re: [AMBER-Developers] Ions parameters in ff12SB (Wed Feb 26 2014 - 10:53:00 PST)
- Re: [AMBER-Developers] Ions parameters in ff12SB (Wed Feb 26 2014 - 06:27:44 PST)
- Re: [AMBER-Developers] Ions parameters in ff12SB (Wed Feb 26 2014 - 05:28:50 PST)
- [AMBER-Developers] Ions parameters in ff12SB (Wed Feb 26 2014 - 05:06:01 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Thu Feb 13 2014 - 04:16:52 PST)
Holger Gohlke
- Re: [AMBER-Developers] Write access to git.ambermd.org (Wed Feb 26 2014 - 00:04:18 PST)
- [AMBER-Developers] Migrated mm_pbsa.pl from src to AmberTools/src (Fri Feb 14 2014 - 09:17:00 PST)
Ilyas Yildirim
- [AMBER-Developers] Cygwin + xleap issue (Sun Feb 09 2014 - 23:09:04 PST)
James Maier
- Re: [AMBER-Developers] [AMBER] ATOMIC NUMBER section in prmtop file - Sustiva example (Sat Feb 08 2014 - 20:05:18 PST)
- Re: [AMBER-Developers] [AMBER] ATOMIC NUMBER section in prmtop file - Sustiva example (Sat Feb 01 2014 - 20:57:46 PST)
Jason Swails
- Re: [AMBER-Developers] Ions parameters in ff12SB (Wed Feb 26 2014 - 11:15:15 PST)
- Re: [AMBER-Developers] Ions parameters in ff12SB (Wed Feb 26 2014 - 05:14:29 PST)
- Re: [AMBER-Developers] sander to AmberTools (Tue Feb 25 2014 - 13:12:03 PST)
- Re: [AMBER-Developers] sander to AmberTools (Tue Feb 25 2014 - 12:27:42 PST)
- Re: [AMBER-Developers] sander to AmberTools (Thu Feb 20 2014 - 18:25:31 PST)
- [AMBER-Developers] sander to AmberTools (Thu Feb 20 2014 - 06:07:14 PST)
- Re: [AMBER-Developers] strange netcdf related mmpbsa test error (Sat Feb 15 2014 - 06:39:07 PST)
- Re: [AMBER-Developers] strange netcdf related mmpbsa test error (Fri Feb 14 2014 - 16:18:14 PST)
- Re: [AMBER-Developers] New features in pmemd (Fri Feb 14 2014 - 03:01:12 PST)
- Re: [AMBER-Developers] mdgx netcdf dependency (Thu Feb 13 2014 - 07:24:26 PST)
- Re: [AMBER-Developers] New features in pmemd (Wed Feb 12 2014 - 19:00:41 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Wed Feb 12 2014 - 15:03:40 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Wed Feb 12 2014 - 14:58:33 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Wed Feb 12 2014 - 10:52:01 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Wed Feb 12 2014 - 09:48:28 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Wed Feb 12 2014 - 07:49:54 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Tue Feb 11 2014 - 14:19:24 PST)
- Re: [AMBER-Developers] one week until code freeze (Tue Feb 11 2014 - 12:07:39 PST)
- Re: [AMBER-Developers] one week until code freeze (Tue Feb 11 2014 - 11:59:00 PST)
- Re: [AMBER-Developers] one week until code freeze (Tue Feb 11 2014 - 08:19:52 PST)
- Re: [AMBER-Developers] one week until code freeze (Tue Feb 11 2014 - 05:32:18 PST)
- Re: [AMBER-Developers] [AMBER] ATOMIC NUMBER section in prmtop file - Sustiva example (Mon Feb 10 2014 - 11:42:59 PST)
- Re: [AMBER-Developers] [AMBER] ATOMIC NUMBER section in prmtop file - Sustiva example (Tue Feb 04 2014 - 09:01:27 PST)
Joe Kaus
- Re: [AMBER-Developers] Compiler backwards compatibility issue (Tue Feb 18 2014 - 16:16:48 PST)
Josh Berryman
- Re: [AMBER-Developers] New features in pmemd (Tue Feb 18 2014 - 07:48:58 PST)
- Re: [AMBER-Developers] New features in pmemd (Tue Feb 18 2014 - 06:43:12 PST)
- Re: [AMBER-Developers] New features in pmemd (Fri Feb 14 2014 - 01:38:13 PST)
- Re: [AMBER-Developers] mdgx netcdf dependency (Thu Feb 13 2014 - 23:53:20 PST)
- [AMBER-Developers] mdgx netcdf dependency (Thu Feb 13 2014 - 04:49:27 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Thu Feb 13 2014 - 04:09:50 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Thu Feb 13 2014 - 01:35:39 PST)
- Re: [AMBER-Developers] New features in pmemd (Thu Feb 13 2014 - 00:25:44 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Tue Feb 11 2014 - 23:40:11 PST)
- Re: [AMBER-Developers] one week until code freeze (Tue Feb 11 2014 - 06:51:50 PST)
Pawel Janowski
- Re: [AMBER-Developers] Ions parameters in ff12SB (Wed Feb 26 2014 - 08:21:55 PST)
Ray Luo, Ph.D.
- Re: [AMBER-Developers] Migrated mm_pbsa.pl from src to AmberTools/src (Fri Feb 14 2014 - 09:26:30 PST)
- Re: [AMBER-Developers] one week until code freeze (Tue Feb 11 2014 - 17:17:50 PST)
- Re: [AMBER-Developers] one week until code freeze (Tue Feb 11 2014 - 15:05:35 PST)
- Re: [AMBER-Developers] one week until code freeze (Tue Feb 11 2014 - 12:39:28 PST)
- Re: [AMBER-Developers] one week until code freeze (Tue Feb 11 2014 - 12:36:15 PST)
- Re: [AMBER-Developers] one week until code freeze (Tue Feb 11 2014 - 10:49:35 PST)
- Re: [AMBER-Developers] one week until code freeze (Tue Feb 11 2014 - 09:45:04 PST)
- Re: [AMBER-Developers] one week until code freeze (Mon Feb 10 2014 - 18:18:30 PST)
- Re: [AMBER-Developers] one week until code freeze (Mon Feb 10 2014 - 15:58:27 PST)
Romain M. Wolf
- Re: [AMBER-Developers] one week until code freeze (Mon Feb 10 2014 - 17:37:26 PST)
Ross Walker
- Re: [AMBER-Developers] New features in pmemd (Tue Feb 18 2014 - 08:32:15 PST)
- Re: [AMBER-Developers] New features in pmemd (Tue Feb 18 2014 - 08:19:31 PST)
- Re: [AMBER-Developers] New features in pmemd (Mon Feb 17 2014 - 22:57:55 PST)
- Re: [AMBER-Developers] New features in pmemd (Mon Feb 17 2014 - 22:36:27 PST)
- Re: [AMBER-Developers] New features in pmemd (Mon Feb 17 2014 - 22:22:08 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Thu Feb 13 2014 - 08:05:31 PST)
- Re: [AMBER-Developers] New features in pmemd (Thu Feb 13 2014 - 08:04:45 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Wed Feb 12 2014 - 15:08:57 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Wed Feb 12 2014 - 15:02:57 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Wed Feb 12 2014 - 14:35:50 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Wed Feb 12 2014 - 10:04:12 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Wed Feb 12 2014 - 09:16:34 PST)
- [AMBER-Developers] Outage for AMBER servers this weekend. (Tue Feb 11 2014 - 14:54:12 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Tue Feb 11 2014 - 14:47:26 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Tue Feb 11 2014 - 14:12:56 PST)
- [AMBER-Developers] 12-6-4 LJ Commit. (Tue Feb 11 2014 - 14:05:00 PST)
- Re: [AMBER-Developers] Parallel Test failures with CUDA 5.5 (Thu Feb 06 2014 - 08:38:16 PST)
- Re: [AMBER-Developers] Parallel Test failures with CUDA 5.5 (Wed Feb 05 2014 - 18:08:20 PST)
- Re: [AMBER-Developers] Parallel Test failures with CUDA 5.5 (Wed Feb 05 2014 - 16:02:43 PST)
Scott Brozell
- Re: [AMBER-Developers] New features in pmemd (Tue Feb 18 2014 - 14:47:48 PST)
- Re: [AMBER-Developers] New features in pmemd (Tue Feb 18 2014 - 02:39:49 PST)
- Re: [AMBER-Developers] New features in pmemd (Tue Feb 18 2014 - 02:27:26 PST)
- Re: [AMBER-Developers] New features in pmemd (Mon Feb 17 2014 - 20:42:13 PST)
Scott Le Grand
- Re: [AMBER-Developers] New features in pmemd (Tue Feb 18 2014 - 06:59:55 PST)
- Re: [AMBER-Developers] New features in pmemd (Tue Feb 18 2014 - 05:56:21 PST)
- Re: [AMBER-Developers] New features in pmemd (Wed Feb 12 2014 - 19:23:37 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Wed Feb 12 2014 - 18:26:24 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Wed Feb 12 2014 - 15:18:21 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Wed Feb 12 2014 - 14:46:28 PST)
- Re: [AMBER-Developers] 12-6-4 LJ Commit. (Wed Feb 12 2014 - 14:13:00 PST)
wmsmith.uci.edu
- Re: [AMBER-Developers] strange netcdf related mmpbsa test error (Fri Feb 14 2014 - 16:30:34 PST)
- [AMBER-Developers] strange netcdf related mmpbsa test error (Fri Feb 14 2014 - 15:29:50 PST)

Amber Developers Archive Feb 2014 by author