Re: [AMBER-Developers] strange netcdf related mmpbsa test error

From: <wmsmith.uci.edu>
Date: Fri, 14 Feb 2014 16:30:34 -0800

Awesome! It looks like setting the LD_LIBRARY_PATH variable solves the
problem.
Thanks,
-Wes
> On Fri, Feb 14, 2014 at 6:59 PM, Daniel Roe <daniel.r.roe.gmail.com>
> wrote:
>
>> You may need to include $AMBERHOME/lib in LD_LIBRARY_PATH, e.g. (bash)
>>
>> export LD_LIBRARY_PATH=$AMBERHOME/lib:$LD_LIBRARY_PATH
>>
>
> Ack, this comes back to nab using "-lnetcdf" in the link line rather than
> specifying the static archive directly. This has been discussed
> extensively recently [http://dev-archive.ambermd.org/201401/ -- a
> long-winded explanation is later in the thread, here
> http://dev-archive.ambermd.org/201401/0079.html].
>
> I remember Dave and I solving this issue by (I think!) adding "-static" to
> FLIBS. .Dave -- should we go ahead and add this to FLIBS?
>
> For now, Wes, adding AMBERHOME/lib to LD_LIBRARY_PATH will do the trick:
>
> export LD_LIBRARY_PATH=$AMBERHOME/lib\:$LD_LIBRARY_PATH
>
> Thanks,
> Jason
>
> --
> Jason M. Swails
> BioMaPS,
> Rutgers University
> Postdoctoral Researcher
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>
>



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Received on Fri Feb 14 2014 - 17:00:02 PST
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