Hello again,
The major moves are done. The sander, addles, amgauss, sebomd, emil,
nmode, and nmr_aux source directories have all been moved from the
$AMBERHOME/src directory to $AMBERHOME/AmberTools/src. The necessary
configure scripts, depend scripts/files, Makefiles, and header include
paths have been updated where necessary such that everything compiles on my
Mac, Linux/Intel, and Linux/GNU machines.
The migration is not fully complete -- the test suites need to be
appropriately updated -- but I am done moving files around. I strongly
encourage everybody to pull the latest commits and merge into any active
branches that you still use. And, of course, please report any problems
you have building and/or testing the current master branch. I tried my
best to make sure I caught everything that could be a problem, but I can't
guarantee I did.
Thanks!
Jason
On Thu, Feb 20, 2014 at 9:07 AM, Jason Swails <jason.swails.gmail.com>wrote:
> Hi everyone,
>
> One of the main goals during the code freeze will be migrating sander to
> AmberTools as discussed at the meeting. This will require moving the
> sander source directory -- as well as related programs like addles,
> nmr_aux, and nmode -- into AmberTools/src. I will be starting that this
> afternoon. I'm not sure how well git will be able to merge commits made
> to the existing sander source code after the code is moved. If you have
> any dangling commits to the sander source code you want me to add to a
> specific branch before I start let me know ASAP (I plan to start ca.
> 1:00 EST).
>
> Any 'big' patches (i.e., not a simple bugfix) that you want in the
> master branch needs to go through Dave for approval.
>
> Thanks!
> Jason
>
> --
> Jason M. Swails
> BioMaPS,
> Rutgers University
> Postdoctoral Researcher
>
>
--
Jason M. Swails
BioMaPS,
Rutgers University
Postdoctoral Researcher
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Received on Thu Feb 20 2014 - 18:30:02 PST
