Amber Developers Archive Mar 2006: by date

Friday, 31 March 2006
- Re: amber-developers: pgf90 and netcdf David A. Case
- Re: amber-developers: pgf90 and netcdf Scott Brozell
- Re: amber-developers: pathscale, gfortran and pgf90 problems David A. Case
- Re: amber-developers: pgf90 and netcdf Scott Brozell
- amber-developers: pgf90 and netcdf David A. Case
- Re: amber-developers: pathscale, gfortran and pgf90 problems Scott Brozell
- Re: amber-developers: pathscale, gfortran and pgf90 problems David A. Case
- Re: amber-developers: pathscale, gfortran and pgf90 problems Robert Duke
- Re: amber-developers: pathscale, gfortran and pgf90 problems John Mongan
- Re: amber-developers: pathscale, gfortran and pgf90 problems Robert Duke
- Re: amber-developers: pathscale, gfortran and pgf90 problems David A. Case
- Re: amber-developers: pathscale, gfortran and pgf90 problems Scott Brozell
- Re: amber-developers: pathscale, gfortran and pgf90 problems David A. Case
- Re: amber-developers: lingering elif's Scott Brozell
- Re: amber-developers: pathscale, gfortran and pgf90 problems Scott Brozell
- Re: amber-developers: lingering elif's David A. Case
- amber-developers: lingering elif's Scott Brozell
- Re: amber-developers: pathscale, gfortran and pgf90 problems Robert Duke
- amber-developers: pathscale, gfortran and pgf90 problems David A. Case
- Re: amber-developers: ti_ggcc tests.. vlimit errors? Thomas Cheatham
Thursday, 30 March 2006
- Re: amber-developers: ti_ggcc tests.. vlimit errors? Thomas E. Cheatham, III
- Re: amber-developers: ti_ggcc tests.. vlimit errors? David A. Case
- Re: amber-developers: ti_ggcc tests.. vlimit errors? Ilyas Yildirim
Wednesday, 29 March 2006
- Re: amber-developers: ti_ggcc tests.. vlimit errors? Michael Crowley
- Re: amber-developers: ti_ggcc tests.. vlimit errors? Thomas E. Cheatham, III
- Re: amber-developers: ti_ggcc tests.. vlimit errors? David A. Case
- amber-developers: ti_ggcc tests.. vlimit errors? Ross Walker
Tuesday, 28 March 2006
- RE: amber-developers: G95 64 bit problems. Ross Walker
- amber-developers: yet another snapshot David A. Case
- Re: amber-developers: G95 64 bit problems. David A. Case
- amber-developers: G95 64 bit problems. Ross Walker
- amber-developers: FW: test failures for QM/mm for SGI Ross Walker
- amber-developers: rem/hybrid test case David Case
- Re: amber-developers: Re: compile problem with evb_input.f (ifort on linux) David A. Case
- Re: amber-developers: amber9-pathscale issue David A. Case
- RE: amber-developers: Re: compile problem with evb_input.f (ifort on linux) David Mathews
- Re: amber-developers: qmmm2/neb_gb;compile problem with evb_input.f (ifort on linux) Robert Duke
- amber-developers: amber9-pathscale issue Andreas Svrcek-Seiler
Monday, 27 March 2006
- Re: amber-developers: Problems with g95 running in x86_64 mode... David A. Case
- Re: amber-developers: qmmm2/neb_gb;compile problem with evb_input.f (ifort on linux) David A. Case
- Re: amber-developers: Problems with g95 running in x86_64 mode... David A. Case
- Re: amber-developers: qmmm2/neb_gb;compile problem with evb_input.f (ifort on linux) Robert Duke
- Re: amber-developers: GB/LES GB1 diffcoords FP exception on Sun Robert Duke
- RE: amber-developers: Re: compile problem with evb_input.f (ifort on linux) Ross Walker
- amber-developers: Re: compile problem with evb_input.f (ifort on linux) David Mathews
- amber-developers: Problems with g95 running in x86_64 mode... Ross Walker
- Re: amber-developers: GB/LES GB1 diffcoords FP exception on Sun carlos
- amber-developers: Improving TEST_FAILURES.DAT naming in AMBER9; rename to TEST_FAILURES.diff Mark Williamson
- Re: amber-developers: GB/LES GB1 diffcoords FP exception on Sun David A. Case
- Re: amber-developers: GB/LES GB1 diffcoords FP exception on Sun carlos
- Re: amber-developers: qmmm2/neb_gb;compile problem with evb_input.f (ifort on linux) David A. Case
- Re: amber-developers: qmmm2/neb_gb;compile problem with evb_input.f (ifort on linux) Robert Duke
- amber-developers: problem with evb_input.f David A. Case
- Re: amber-developers: GB/LES GB1 diffcoords FP exception on Sun David A. Case
- amber-developers: qmmm2/neb_gb;compile problem with evb_input.f (ifort on linux) David Mathews
- Re: amber-developers: qmmm2/neb_gb ; ./Run.neb_link_atoms_qmgb2 crash on Sun David A. Case
- Re: amber-developers: Re: More sun issues David A. Case
- Re: amber-developers: Re: More sun issues Scott Brozell
- RE: amber-developers: qmmm2/neb_gb ; ./Run.neb_link_atoms_qmgb2 crash on Sun Ross Walker
- Re: amber-developers: GB/LES GB1 diffcoords FP exception on Sun Carlos Simmerling
- amber-developers: qmmm2/neb_gb ; ./Run.neb_link_atoms_qmgb2 crash on Sun John Mongan
- amber-developers: GB/LES GB1 diffcoords FP exception on Sun John Mongan
- Re: amber-developers: Re: More sun issues Scott Brozell
- Re: amber-developers: Re: More sun issues John Mongan
- Re: amber-developers: Re: More sun issues David A. Case
- Re: amber-developers: Re: More sun issues Scott Brozell
- Re: amber-developers: Re: More sun issues David A. Case
- amber-developers: Re: More sun issues Scott Brozell
Sunday, 26 March 2006
- amber-developers: More sun issues Scott Brozell
- Re: amber-developers: More sun configure problems Scott Brozell
Friday, 24 March 2006
- Re: amber-developers: More sun configure problems David A. Case
- Re: amber-developers: fourth snapshot for Amber 9 is now available David A. Case
- amber-developers: More sun configure problems John Mongan
- Re: amber-developers: fourth snapshot for Amber 9 is now available John Mongan
Thursday, 23 March 2006
- amber-developers: fourth snapshot for Amber 9 is now available David A. Case
Tuesday, 21 March 2006
- amber-developers: final amber 9 snapshot delayed David A. Case
Monday, 20 March 2006
- Re: amber-developers: Proposal: a firefox extension for amber8 html-based user manual Xuebin Qiao
Sunday, 19 March 2006
- Re: amber-developers: Problem with SHAKE when icfe != 0 Ilyas Yildirim
- Re: amber-developers: Problem with SHAKE when icfe != 0 David A. Case
- Re: amber-developers: Problem with SHAKE when icfe != 0 Ilyas Yildirim
- RE: amber-developers: Proposal: a firefox extension for amber8 html-based user manual Ross Walker
- amber-developers: Proposal: a firefox extension for amber8 html-based user manual Xuebin Qiao
Saturday, 18 March 2006
- Re: amber-developers: Problem with SHAKE when icfe != 0 David A. Case
Friday, 17 March 2006
- Re: amber-developers: Problem with SHAKE when icfe != 0 Ilyas Yildirim
- Re: amber-developers: Problem with SHAKE when icfe != 0 David A. Case
Thursday, 16 March 2006
- amber-developers: Problem with SHAKE when icfe != 0 Ilyas Yildirim
- Re: amber-developers: test case failures Robert Duke
- amber-developers: test case failures David A. Case
Wednesday, 15 March 2006
- amber-developers: amber9 REMD bug Carlos Simmerling
Sunday, 12 March 2006
- Re: amber-developers: Problem in ptraj when using mmpbsa Ray Luo
Tuesday, 14 March 2006
- Re: amber-developers: Problem in ptraj when using mmpbsa Carlos Simmerling
- Re: amber-developers: Problem in ptraj when using mmpbsa Thomas E. Cheatham, III
Sunday, 12 March 2006
- amber-developers: Problem in ptraj when using mmpbsa Ray Luo
Friday, 10 March 2006
- Re: amber-developers: No DV/DL values at clambda=1 for vdW pert B. Lachele Foley
- Re: amber-developers: No DV/DL values at clambda=1 for vdW pert Ilyas Yildirim
- Re: amber-developers: No DV/DL values at clambda=1 for vdW pert B. Lachele Foley
- Re: amber-developers: No DV/DL values at clambda=1 for vdW pert David A. Case
- Re: amber-developers: No DV/DL values at clambda=1 for vdW pert Ilyas Yildirim
- amber-developers: No DV/DL values at clambda=1 for vdW pert B. Lachele Foley
Thursday, 9 March 2006
- Re: amber-developers: Undocumented namelist variables -> tracing David A. Case
Wednesday, 8 March 2006
- Re: amber-developers: Undocumented namelist variables Ray Luo
Thursday, 9 March 2006
- Re: amber-developers: Undocumented namelist variables -> tracing Scott Brozell
- Re: amber-developers: Undocumented namelist variables David A. Case
- Re: amber-developers: Undocumented namelist variables Robert Duke
- amber-developers: Undocumented namelist variables David A. Case
- amber-developers: [sbrozell.scripps.edu: pbsa undocumented maxarc] David A. Case
- Re: amber-developers: bench.jac fails in for amber9 David A. Case
- Re: amber-developers: bench.jac fails in for amber9 Robert Duke
- Re: amber-developers: pbsa undocumented maxarc (fwd) Scott Brozell
- Re: amber-developers: bench.jac fails in for amber9 Scott Brozell
Wednesday, 8 March 2006
- Re: amber-developers: pbsa undocumented maxarc (fwd) Ray Luo
Thursday, 9 March 2006
- amber-developers: bench.jac fails in for amber9 Andreas Svrcek-Seiler
- amber-developers: pbsa undocumented maxarc (fwd) Scott Brozell
- amber-developers: [sbrozell.scripps.edu: pbsa: nsaa bug] David A. Case
Monday, 6 March 2006
- Re: amber-developers: cap, igb=10 (or not) and charge perturbation B. Lachele Foley
- Re: amber-developers: cap, igb=10 (or not) and charge perturbation David A. Case
- Re: amber-developers: cap, igb=10 (or not) and charge perturbation B. Lachele Foley
- Re: amber-developers: cap, igb=10 (or not) and charge perturbation David A. Case
Saturday, 4 March 2006
- Re: amber-developers: cap, igb=10 (or not) and charge perturbation Ray Luo
Monday, 6 March 2006
- amber-developers: cap, igb=10 (or not) and charge perturbation B. Lachele Foley
Saturday, 4 March 2006
- Re: amber-developers: Typo: INSTALL David A. Case
Friday, 3 March 2006
- amber-developers: Typo: INSTALL Mengjuei Hsieh
- amber-developers: "near-final" version of the Users' Manual David A. Case
Thursday, 2 March 2006
- Re: amber-developers: Work is needed on the Users' Manual! David A. Case
- Re: amber-developers: Work is needed on the Users' Manual! Ray Luo
- Re: amber-developers: problems with parallel installation of Amber 9 Scott Brozell
- Re: amber-developers: problems with parallel installation of Amber 9 Robert Duke
- Re: amber-developers: problems with parallel installation of Amber 9 Ruzhu Chen
- amber-developers: Fwd: problems with parallel installation of Amber 9 B. Lachele Foley
- amber-developers: problems with parallel installation of Amber 9 David A. Case

Last message date: Wed Apr 05 2006 - 23:49:42 PDT
Archived on: Mon Apr 22 2024 - 05:02:28 PDT

Amber Developers Archive Mar 2006 by date