Amber Developers Archive Sep 2008: By Thread

amber-developers: dsum_tol and shake tolerance on energy conservation Ross Walker (Fri Sep 05 2008 - 09:01:56 PDT)
- Re: amber-developers: dsum_tol and shake tolerance on energy conservation Robert Duke (Fri Sep 05 2008 - 09:17:08 PDT)
  - Re: amber-developers: dsum_tol and shake tolerance on energy conservation David A. Case (Thu Sep 11 2008 - 10:27:10 PDT)
RE: amber-developers: Ptraj Patch for Ambertools 1.2 (beta) Ross Walker (Fri Sep 05 2008 - 14:41:27 PDT)
amber-developers: Testing of PIMD / NEB? (Broken in AMBER 10) Ross Walker (Fri Sep 05 2008 - 14:46:38 PDT)
- Re: amber-developers: Testing of PIMD / NEB? (Broken in AMBER 10) Carlos Simmerling (Mon Sep 08 2008 - 08:21:37 PDT)
  - Re: amber-developers: Testing of PIMD / NEB? (Broken in AMBER 10) Francesco Paesani (Mon Sep 08 2008 - 17:04:51 PDT)
    - Re: amber-developers: Testing of PIMD / NEB? (Broken in AMBER 10) Wei Zhang (Tue Sep 09 2008 - 08:08:59 PDT)
    - Re: amber-developers: Testing of PIMD / NEB? (Broken in AMBER 10) Scott Brozell (Wed Sep 10 2008 - 18:06:02 PDT)
    - Re: amber-developers: Testing of PIMD / NEB? (Broken in AMBER 10) Wei Zhang (Thu Sep 11 2008 - 07:52:01 PDT)
    - Re: amber-developers: Testing of PIMD / NEB? (Broken in AMBER 10) David A. Case (Thu Sep 11 2008 - 08:05:31 PDT)
    - amber-developers: total charge of NPRO in all_aminont03.lib is not integer Wei Zhang (Thu Sep 11 2008 - 08:23:42 PDT)
    - Re: amber-developers: total charge of NPRO in all_aminont03.lib is not integer Carlos Simmerling (Thu Sep 11 2008 - 08:31:53 PDT)
    - Re: amber-developers: total charge of NPRO in all_aminont03.lib is not integer David A. Case (Thu Sep 11 2008 - 08:55:59 PDT)
    - Re: amber-developers: Testing of PIMD / NEB? (Broken in AMBER 10) Wei Zhang (Tue Sep 09 2008 - 08:44:43 PDT)
    - RE: amber-developers: Testing of PIMD / NEB? (Broken in AMBER 10) Ross Walker (Wed Sep 10 2008 - 05:24:01 PDT)
    - Re: amber-developers: Testing of PIMD / NEB? (Broken in AMBER 10) Wei Zhang (Wed Sep 10 2008 - 09:41:56 PDT)
amber-developers: Re: Installing Ambertools in cygwin Gustavo Seabra (Sat Sep 06 2008 - 15:09:04 PDT)
- Re: amber-developers: Re: Installing Ambertools in cygwin Scott Brozell (Sat Sep 06 2008 - 16:25:31 PDT)
- Re: amber-developers: Re: Installing Ambertools in cygwin David A. Case (Sat Sep 06 2008 - 18:37:50 PDT)
amber-developers: dsum_tol and shake tolerance on energy conservation (another example) Volodymyr Babin (Mon Sep 08 2008 - 10:47:47 PDT)
- RE: amber-developers: dsum_tol and shake tolerance on energy conservation (another example) Ross Walker (Wed Sep 10 2008 - 05:22:48 PDT)
  - RE: amber-developers: dsum_tol and shake tolerance on energy conservation (another example) Volodymyr Babin (Wed Sep 10 2008 - 09:51:13 PDT)
    - RE: amber-developers: dsum_tol and shake tolerance on energy conservation (another example) Ross Walker (Wed Sep 10 2008 - 10:00:25 PDT)
amber-developers: Re: [Fwd: input coords for REMD in Amber9] David A. Case (Thu Sep 11 2008 - 08:59:43 PDT)
- Re: amber-developers: Re: [Fwd: input coords for REMD in Amber9] Daniel Roe (Thu Sep 11 2008 - 09:14:48 PDT)
  - Re: amber-developers: Re: [Fwd: input coords for REMD in Amber9] Daniel Roe (Thu Sep 11 2008 - 14:19:22 PDT)
- Re: amber-developers: Re: [Fwd: input coords for REMD in Amber9] Volodymyr Babin (Thu Sep 11 2008 - 09:32:28 PDT)
  - Re: amber-developers: Re: [Fwd: input coords for REMD in Amber9] Carlos Simmerling (Thu Sep 11 2008 - 09:42:16 PDT)
- Re: amber-developers: Re: [Fwd: input coords for REMD in Amber9] Daniel Roe (Mon Sep 22 2008 - 11:36:49 PDT)
amber-developers: AMBER11 CVS build error when DEBUG is set Mark Williamson (Thu Sep 11 2008 - 13:40:22 PDT)
- Re: amber-developers: AMBER11 CVS build error when DEBUG is set David A. Case (Thu Sep 11 2008 - 13:49:48 PDT)
- Re: amber-developers: AMBER11 CVS build error when DEBUG is set Gustavo Seabra (Thu Sep 11 2008 - 14:00:18 PDT)
amber-developers: Roll back of Thole Screening modification in sander cvs. Ross Walker (Thu Sep 18 2008 - 13:47:13 PDT)
amber-developers: Moving of AMBER CVS Tree Ross Walker (Wed Sep 24 2008 - 16:56:20 PDT)
amber-developers: AMBER CVS Tree locked Ross Walker (Thu Sep 25 2008 - 16:34:19 PDT)
amber-developers: AMBER CVS TREE MOVED Ross Walker (Thu Sep 25 2008 - 18:23:18 PDT)
- Re: amber-developers: AMBER CVS TREE MOVED David A. Case (Fri Sep 26 2008 - 05:31:05 PDT)
  - RE: amber-developers: AMBER CVS TREE MOVED Ross Walker (Fri Sep 26 2008 - 07:26:53 PDT)
    - Re: amber-developers: AMBER CVS TREE MOVED David A. Case (Fri Sep 26 2008 - 10:14:46 PDT)
    - Re: amber-developers: AMBER CVS TREE MOVED Seth Hayik (Fri Sep 26 2008 - 10:48:47 PDT)
amber-developers: Some testing result on pmemd scaling and parallel computation Mengjuei Hsieh (Mon Sep 29 2008 - 18:27:37 PDT)
- Re: amber-developers: Some testing result on pmemd scaling and parallel computation Robert Duke (Mon Sep 29 2008 - 19:03:41 PDT)

Amber Developers Archive Sep 2008 By Thread