Re: [AMBER-Developers] AmberTools/src/configure2 -mpi problem

From: Gerald Monard <Gerald.Monard.univ-lorraine.fr>
Date: Sun, 26 Jan 2014 20:14:15 +0000

Hi,

After some checkings, the problem appears only when using the intel
compiler.
I include in attachement a possible workaround.
I haven't tested it with cuda. The error message says it is needed for
cuda but I can't see why...

Gerald.

On 01/25/2014 11:59 PM, Gerald Monard wrote:
> Hi,
>
> Since commit 772a27496687c677c20a2bd773671120c1dbbad9, configure2
> fails with my installation either with mpich2 (mpich-3.0.4) or openmpi
> (openmpi-1.6.5) when using at least the intel compiler:
>
> Configuring fftw-3.3 for mdgx (may be time-consuming)...
>
> fftw-3.3 configure succeeded.
>
> Error! Could not link C++ mpi code using mpi fortran linker:
> "mpif90 -lstdc++ -lmpi_cxx"
> [C++ / fortran / MPI] cross-linking is needed for CUDA and EMIL builds.
> Try: "mpif90 -show"
> Configure failed due to the errors above!
>
> If I remove these new tests in configure2, I can still compile correctly
> sander.MPI and pmemd.MPI (but I didn't test cuda).
>
> It seems that the dashboard shows the problem also.
>
> Gerald.
>

-- 
____________________________________________________________________________
  Prof. Gerald MONARD
  SRSMC, Université de Lorraine, CNRS
  Boulevard des Aiguillettes B.P. 70239
  F-54506 Vandoeuvre-les-Nancy, FRANCE
  e-mail : Gerald.Monard.univ-lorraine.fr
  tel.   : +33 (0)383.684.381
  fax    : +33 (0)383.684.371
  web    : http://www.monard.info
____________________________________________________________________________



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Received on Sun Jan 26 2014 - 12:30:02 PST
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