On Fri, May 21, 2010 at 3:24 PM, case <case.biomaps.rutgers.edu> wrote:
> On Fri, May 21, 2010, Jason Swails wrote:
> >
> > I haven't heard about this in quite some time (and the wiki still says
> > "we're working on it"), so I thought I'd ask about any updates. Do we
> have
> > a timeline yet or are we still trying to figure out how to work it?
> >
> > Also, if testers are needed, I have some very localized changes that I
> can
> > try out (MMPBSA.py, so it won't affect anything outside of the
> > amber/src/mmpbsa_py directory and its corresponding test directory) with
> no
> > risk to the rest of the tree. I'm also sitting on Yilin's constant pH
> REMD
> > code/hamiltonian REMD code (that works and passes all tests) that I could
> > try to push in, also.
> >
> > Just let me know if I should sit on these a while longer or if you'd like
> me
> > to do anything with either update. I can also send patches if that's
> > desired.
>
> I've added user "swails" to the write list for amber and amber_web.
> Assuming
> that you cloned things using gitosis, you should now be able to (carefully)
> do a git push. To be "careful":
>
> a. do a "git pull" immediately before any "git push"
>
Yes, this is a habit I picked up with our local git repos for our own
projects (that I set up to get a feel for git).
> b. also, do a "git diff --stat origin/master" to see which files will be
> transferred, checking that you are not pushing things you don't intend
> to.
>
Did not know about this one. Thanks. I will make sure the only thing I
push for now is the MMPBSA.py stuff (source and tests). If everything goes
well, I should push yilin's changes to constant pH and REMD? Or should I
hold off on sander mods?
Thanks!
Jason
>
> [Mark or Ross: do you know how to set things up so that pushes to the
> git.ambermd.org repos trigger emails, similar to what was done with CVS?]
>
> ...thanks....dac
>
>
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>
--
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Graduate Student
352-392-4032
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Received on Fri May 21 2010 - 13:30:03 PDT
