Re: amber-developers: problems with NCSU in amber10

From: Carlos Simmerling <>
Date: Mon, 14 Apr 2008 14:05:46 -0400

the netcdf part does show up in ncsu-umbrella.f unless you add
which is not set up by config if you say nobintraj. when I set that things
are working ok,
thanks for the quick reply.
we're using nobintraj just because it was a hassle recently on blue gene and
I didn't want to deal
with it while fixing other problems.

On Mon, Apr 14, 2008 at 1:39 PM, David A. Case <> wrote:

> On Mon, Apr 14, 2008, Carlos Simmerling wrote:
> > I've got several problems with the NCSU code that I would put into
> > bugzilla but want to confirm first that we've not done something wrong.
> >
> > ifort -c -w95 -vec_report0 -mp1 -ip -O3 -axNP -FR "-DDISABLE_NCSU" -o
> > ncsu-umbrella.o _ncsu-umbrella.f
> > fortcom: Error: _ncsu-umbrella.f, line 114: Error in opening the Library
> > module file. [NETCDF]
> > use netcdf, only : nf90_double, nf90_float
> > ----^
> >
> > this was compiled with nobintraj so should not be looking for netcdf
> I can't reproduce this here. The code in ncsu-umbrella.f looks OK to me
> on first glance. The offending "use netcdf" line should not be in the
> cpp-processed code (i.e. not in _ncsu-umbrella.f).
> So, the problem looks like it is in the cpp step, and should not depend on
> compiler, etc. Check what happened in the step right before the one you
> quote above, and look at the _ncsu-umbrella.f file to see what you have.
> [Just the obvious suggestions: make sure that you really have a clean
> working
> directory and the latest versions of the code -- although the ncsu stuff
> has
> not changed in since last December or so.]
> At a higher level: why are you turning off netcdf? If people are having
> problems with this, we need to know about it.
> ...dac
Received on Fri Apr 18 2008 - 21:19:18 PDT
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