Re: [AMBER-Developers] Test cases have been fixed: paths ot executables work again

From: Hai Nguyen <>
Date: Wed, 06 Sep 2017 13:02:36 +0000


Btw, I saw the update for submodules. Can you double check if your commit
the correct? For example pytraj was not updated for a while but still
seeing in your log

Summary of changes:
 AmberTools/src/ambertools-binary-build | 2 +-
 AmberTools/src/cphstats | 2 +-
 AmberTools/src/cpptraj | 2 +-
 AmberTools/src/parmed | 2 +-
 AmberTools/src/pytraj | 2 +-

cd Ambertools/src/pytraj
git diff origin/master

(On train now so I can not check)

On Wed, Sep 6, 2017 at 2:44 AM David Cerutti <> wrote:

> Hey AmberDevs,
> So it appears that for some time the test cases have been thoroughly broken
> (Ross, we were better off with your hawkish prodding on this). The problem
> has been traced, and I have devised some workarounds. All executables
> referenced by the test cases will now read ${AMBERHOME}/bin/<name>. This
> has been done for what I THINK are all the test cases in the main suite,
> and I will get to AmberTools soon. Having verified that the test cases now
> pass for me once again, I am committing these edits directly to the master
> branch. Please let me know if you experience any problems--it SHOULD be a
> giant improvement over recent behavior, but there is such a diversity of
> test cases, file names, and conventions that I may have missed something.
> Cheers,
> Dave
> _______________________________________________
> AMBER-Developers mailing list
AMBER-Developers mailing list
Received on Wed Sep 06 2017 - 06:30:04 PDT
Custom Search