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-- Ray Luo, Ph.D. Professor of Structural Biology/Biochemistry/Biophysics, Chemical Physics, Biomedical Engineering, and Chemical Engineering Department of Molecular Biology and Biochemistry University of California, Irvine, CA 92697-3900 On Fri, Mar 10, 2017 at 11:27 AM, Daniel Roe <daniel.r.roe.gmail.com> wrote: > Still will not work for me; *lots* of complaints from the compiler > (attached). Brief google search seems to indicate it may be due to a > missing -lstdc++ flag but unfortunately I don't have time to test > right now. > > Compiler: GNU 4.8.4 > CUDA: 7.5 > > -Dan > > On Fri, Mar 10, 2017 at 1:53 PM, Ray Luo <rluo.uci.edu> wrote: >> Cool! >> >> Ray >> -- >> Ray Luo, Ph.D. >> Professor of Structural Biology/Biochemistry/Biophysics, >> Chemical Physics, Biomedical Engineering, and Chemical Engineering >> Department of Molecular Biology and Biochemistry >> University of California, Irvine, CA 92697-3900 >> >> >> On Fri, Mar 10, 2017 at 10:38 AM, Tyler Luchko (Lists) >> <tluchko.lists.gmail.com> wrote: >>> >>>> On Mar 10, 2017, at 9:15 AM, David Case <david.case.rutgers.edu <mailto:david.case.rutgers.edu>> wrote: >>>> >>>> On Fri, Mar 10, 2017, Dan Roe wrote: >>>> >>>>> My mistake - I was looking at $AMBERHOME/GNU_LGPL_v2. It appears that >>>>> is distributed with non-AmberTools Amber (via mkrelease). Should that >>>>> be updated? >>>> >>>> Good catch...I have no recollection of why the GNU_LGPL_v2 file is there, but >>>> I think it doesn't belong there now. Does anyone remember what is going >>>> on? My best guess (and only a guess) is that was related to the blend >>>> library, which at one time said it was "LGPL" without specifying the version. >>>> We now say it is version 3, but the v2 file might have come from that time >>>> period--cc-ing to Tyler to see if he remembers anything about this. >>>> >>>> Unless someone comes up with an explanation, I'll deep-six the v2 file. >>> >>> 3D-RISM uses the blend library. The author’s webpage points to the latest version of the LGPL, which is version 3. >>> >>> https://people.sc.fsu.edu/~jburkardt/f_src/blend/blend.html <https://people.sc.fsu.edu/~jburkardt/f_src/blend/blend.html> >>> >>> Updating to version 3 should be fine. The code hasn’t changed. >>> >>> Tyler >>> >>> _______________________________________________ >>> AMBER-Developers mailing list >>> AMBER-Developers.ambermd.org >>> http://lists.ambermd.org/mailman/listinfo/amber-developers >> >> _______________________________________________ >> AMBER-Developers mailing list >> AMBER-Developers.ambermd.org >> http://lists.ambermd.org/mailman/listinfo/amber-developers > > > > -- > ------------------------- > Daniel R. Roe > Laboratory of Computational Biology > National Institutes of Health, NHLBI > 5635 Fishers Ln, Rm T900 > Rockville MD, 20852 > https://www.lobos.nih.gov/lcb > > _______________________________________________ > AMBER-Developers mailing list > AMBER-Developers.ambermd.org > http://lists.ambermd.org/mailman/listinfo/amber-developers >