[AMBER-Developers] SEBOMD Breaks -jx Build

From: Ross Walker <ross.rosswalker.co.uk>
Date: Mon, 27 Jan 2014 20:42:10 -0800

Git Tree as of 20:30 PST Jan 27th 2014:

./configure gnu
make -j8 install

gfortran -DBINTRAJ -DEMIL -c -O3 -mtune=native
-I/cbio/jclab/home/rcw/amber/include -I/cbio/jclab/home/rcw/amber/include
  -DRISMSANDER -I../sander -o se_corrections_tools.o
se_corrections_tools.F90
gfortran -DBINTRAJ -DEMIL -c -O3 -mtune=native
-I/cbio/jclab/home/rcw/amber/include -I/cbio/jclab/home/rcw/amber/include
  -DRISMSANDER -I../sander -o se_corrections_module.o
se_corrections_module.F90
se_corrections_module.F90:20.55:

                                  computeGauss, compPEP
                                                       1
Fatal Error: Can't open module file 'se_corrections_tools.mod' for reading
at (1): No such file or directory
make[3]: *** [se_corrections_module.o] Error 1
make[3]: *** Waiting for unfinished jobs....
se_corrections_tools.F90:14.75:

                                   initMAISparams, checkMAIS, getMAISparams
                   
1
Fatal Error: Can't open module file 'se_corrections_params.mod' for
reading at (1): No such file or directory
make[3]: *** [se_corrections_tools.o] Error 1
make[3]: Leaving directory `/cbio/jclab/home/rcw/amber/src/sebomd'
make[2]: *** [sebomd] Error 2
make[2]: Leaving directory `/cbio/jclab/home/rcw/amber/src/sander'
make[1]: *** [serial] Error 2
make[1]: Leaving directory `/cbio/jclab/home/rcw/amber/src'
make: *** [install] Error 2




However then issuing

make install

works.

Looks like the dependencies for SEBOMD need updating properly.

All the best
Ross

/\
\/
|\oss Walker

---------------------------------------------------------
| Associate Research Professor |
| San Diego Supercomputer Center |
| Adjunct Associate Professor |
| Dept. of Chemistry and Biochemistry |
| University of California San Diego |
| NVIDIA Fellow |
| http://www.rosswalker.co.uk | http://www.wmd-lab.org |
| Tel: +1 858 822 0854 | EMail:- ross.rosswalker.co.uk |
---------------------------------------------------------

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Received on Mon Jan 27 2014 - 21:00:02 PST
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