I'm not 100% sure but I think mdgx may require '-lnetcdf' since it can
be built as a shared library. Probably we will need to have
'netcdf_flag' in configure2 set as a separate variable in config.h
(e.g. NETCDF_FLAG) instead of having it just be part of FLIBS, and
have programs that require '-lnetcdf' (like nab and mdgx) use that.
-Dan
On Fri, Sep 27, 2013 at 2:51 PM, Crowley, Michael
<Michael.Crowley.nrel.gov> wrote:
> Looks like mdgx also has -lnetcdf hardcoded in its Makefile. Do we just
> replace it with $(NETCDFLIB) ?
> Mike
> --
> Michael F. Crowley, Ph.D.
> Principal Scientist, Biomolecular Sciences Division
> National Renewable Energy Laboratory
> 1617 Cole Blvd.
> Golden, CO 80401
> 303-384-6345 office
> 303-887-0149 cell
>
>
>
>
>
>
>
> On 9/27/13 1:22 PM, "Crowley, Michael" <Michael.Crowley.nrel.gov> wrote:
>
>>Sorry about the double emails, don't know why NREL's server is doing that.
>>--
>>Michael F. Crowley, Ph.D.
>>Principal Scientist, Biomolecular Sciences Division
>>National Renewable Energy Laboratory
>>1617 Cole Blvd.
>>Golden, CO 80401
>>303-384-6345 office
>>303-887-0149 cell
>>
>>
>>
>>
>>
>>On 9/27/13 1:19 PM, "Crowley, Michael" <Michael.Crowley.nrel.gov> wrote:
>>
>>>Thanks Jason,
>>>I will try that also. Just noticed someone added the pgi compilers into
>>>the default module load, that may be interfering, who knows.
>>>Mike
>>>
>>>--
>>>Michael F. Crowley, Ph.D.
>>>Principal Scientist, Biomolecular Sciences Division
>>>National Renewable Energy Laboratory
>>>1617 Cole Blvd.
>>>Golden, CO 80401
>>>303-384-6345 office
>>>303-887-0149 cell
>>>
>>>
>>>
>>>
>>>
>>>On 9/27/13 11:56 AM, "Jason Swails" <jason.swails.gmail.com> wrote:
>>>
>>>>On Fri, Sep 27, 2013 at 1:35 PM, David A Case
>>>><case.biomaps.rutgers.edu>wrote:
>>>>
>>>>> On Fri, Sep 27, 2013, Crowley, Michael wrote:
>>>>>
>>>>> > This is the netcdf problem, something about a tag:
>>>>>
>>>>> Does it happen with gnu compilers? Which version of intel compilers
>>>>>are
>>>>> you
>>>>> using?
>>>>>
>>>>
>>>>The only time I've seen this before is when compiler environment
>>>>variables
>>>>are set. What happens if you try
>>>>
>>>>unset FC F90 CC CXX F77
>>>>
>>>>and then try to build? (unsetenv if you are using cshell).
>>>>
>>>>--
>>>>Jason M. Swails
>>>>BioMaPS,
>>>>Rutgers University
>>>>Postdoctoral Researcher
>>>>_______________________________________________
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>>>
>>>
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>>
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--
-------------------------
Daniel R. Roe, PhD
Department of Medicinal Chemistry
University of Utah
30 South 2000 East, Room 201
Salt Lake City, UT 84112-5820
http://home.chpc.utah.edu/~cheatham/
(801) 587-9652
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Received on Fri Sep 27 2013 - 14:30:03 PDT
