Re: [AMBER-Developers] Intel AT/Automake issue

From: B. Lachele Foley <lfoley.uga.edu>
Date: Tue, 31 May 2011 17:06:30 +0000

> I really hate autotools....that said, users should never be running automake in the first place. Just to be sure: I didn't run it myself. It happened in the middle of "make install" -- a good half hour into it. All the "./configure intel" parts happened without incident. > The 973fc890bdc75 commit to Makefile.in was supposed to Again, just to be sure: I got a fresh pull this morning. > (What is "rhel 4u5"?) $ cat /etc/redhat-release Red Hat Enterprise Linux AS release 4 (Nahant Update 5) $ uname -a Linux yeats 2.6.9-67.0.4.EL_SFS2.3_0smp #1 SMP Thu Nov 27 12:58:33 GMT 2008 x86_64 x86_64 x86_64 GNU/Linux > Lachele: can you post the *entire* log file involving fftw-2.1.5, i.e. not just the immediate context? Done. Is there a log from the install somewhere? I can run it again and send more context. I was surprised to see "automake" in the middle of it. :-) Lachele Dr. B. Lachele Foley Complex Carbohydrate Research Center The University of Georgia Athens, GA USA lfoley.uga.edu http://glycam.ccrc.uga.edu ________________________________________ From: David A Case [case.biomaps.rutgers.edu] Sent: Tuesday, May 31, 2011 12:40 PM To: AMBER Developers Mailing List Subject: Re: [AMBER-Developers] Intel AT/Automake issue On Tue, May 31, 2011, B. Lachele Foley wrote: > Trying to install using Intel on a rhel 4u5 machine. The problem is: > > /bin/sh /programs/amber.git/AmberTools/src/fftw-2.1.5/missing --run automake-1.7 --gnu threads/Makefile I really hate autotools....that said, users should never be running automake in the first place. The 973fc890bdc75 commit to Makefile.in was supposed to prevent errors like the above from happening, but clearly something is not working the way it should. Can we instatiate the actual Makefiles (not just Makefile.in), and maybe even avoid configure altogether? Is it possible to figure out what is present/missing on Lachele's machine? (What is "rhel 4u5"?) Lachele: can you post the *entire* log file involving fftw-2.1.5, i.e. not just the immediate context? I'm really clueless here, just venting my annoyance. The workaround is probably to upgrade automake (my machine has versions 1.11), but comments in various files indicate that 1.7 should work. ....dac _______________________________________________ AMBER-Developers mailing list AMBER-Developers.ambermd.org http://lists.ambermd.org/mailman/listinfo/amber-developers

_______________________________________________
AMBER-Developers mailing list
AMBER-Developers.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber-developers

Received on Tue May 31 2011 - 10:30:02 PDT
Custom Search