This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by configure, which was generated by GNU Autoconf 2.59. Invocation command line was $ ./configure --prefix=/programs/amber.git --enable-type-prefix --enable-static=yes CC=icc CFLAGS= -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 F77=ifort FFLAGS= -ip -O3 -xHost FLIBS=-L/opt/intel/Compiler/11.0/083/lib/intel64/ -lifport -lifcore -lsvml --no-create --no-recursion ## --------- ## ## Platform. ## ## --------- ## hostname = yeats uname -m = x86_64 uname -r = 2.6.9-67.0.4.EL_SFS2.3_0smp uname -s = Linux uname -v = #1 SMP Thu Nov 27 12:58:33 GMT 2008 /usr/bin/uname -p = unknown /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /programs/amber.git/bin PATH: /opt/pbs/10.0.0.82981/bin PATH: /programs/amber11_20110530/bin PATH: /users/installer/bin PATH: /opt/hpmpi/bin PATH: /opt/intel/Compiler/11.0/083/bin/intel64 PATH: /opt/intel/Compiler/11.0/083/bin/intel64 PATH: /opt/jre1.5.0_12/bin PATH: /usr/kerberos/bin PATH: /usr/local/bin PATH: /bin PATH: /usr/bin PATH: /usr/X11R6/bin ## ----------- ## ## Core tests. ## ## ----------- ## configure:1550: checking for a BSD-compatible install configure:1605: result: /usr/bin/install -c configure:1616: checking whether build environment is sane configure:1659: result: yes configure:1692: checking for gawk configure:1708: found /bin/gawk configure:1718: result: gawk configure:1728: checking whether make sets $(MAKE) configure:1748: result: yes configure:2018: checking type prefix for installed files configure:2026: result: d configure:2116: checking for vendor's cc to be used instead of gcc configure:2120: checking for cc configure:2146: result: icc configure:2470: checking for C compiler version configure:2473: icc --version &5 icc (ICC) 11.0 20090318 Copyright (C) 1985-2009 Intel Corporation. All rights reserved. configure:2476: $? = 0 configure:2478: icc -v &5 Version 11.0 configure:2481: $? = 0 configure:2483: icc -V &5 Intel(R) C Intel(R) 64 Compiler Professional for applications running on Intel(R) 64, Version 11.0 Build 20090318 Package ID: l_cproc_p_11.0.083 Copyright (C) 1985-2009 Intel Corporation. All rights reserved. configure:2486: $? = 0 configure:2509: checking for C compiler default output file name configure:2512: icc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 configure:2515: $? = 0 configure:2561: result: a.out configure:2566: checking whether the C compiler works configure:2572: ./a.out configure:2575: $? = 0 configure:2592: result: yes configure:2599: checking whether we are cross compiling configure:2601: result: no configure:2604: checking for suffix of executables configure:2606: icc -o conftest -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 configure:2609: $? = 0 configure:2634: result: configure:2640: checking for suffix of object files configure:2661: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 configure:2664: $? = 0 configure:2686: result: o configure:2690: checking whether we are using the GNU C compiler configure:2714: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 configure:2720: $? = 0 configure:2724: test -z || test ! -s conftest.err configure:2727: $? = 0 configure:2730: test -s conftest.o configure:2733: $? = 0 configure:2746: result: yes configure:2752: checking whether icc accepts -g configure:2773: icc -c -g conftest.c >&5 configure:2779: $? = 0 configure:2783: test -z || test ! -s conftest.err configure:2786: $? = 0 configure:2789: test -s conftest.o configure:2792: $? = 0 configure:2803: result: yes configure:2820: checking for icc option to accept ANSI C configure:2890: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 configure:2896: $? = 0 configure:2900: test -z || test ! -s conftest.err configure:2903: $? = 0 configure:2906: test -s conftest.o configure:2909: $? = 0 configure:2927: result: none needed configure:2945: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 conftest.c(2): error: identifier "choke" is undefined choke me ^ conftest.c(3): error: expected a ";" compilation aborted for conftest.c (code 2) configure:2951: $? = 2 configure: failed program was: | #ifndef __cplusplus | choke me | #endif configure:3095: checking for style of include used by make configure:3123: result: GNU configure:3151: checking dependency style of icc configure:3234: result: gcc3 configure:3253: checking whether we are using gcc 2.90 or later configure:3267: icc -E conftest.c configure:3270: $? = 0 configure:3278: result: yes configure:3301: checking for a BSD-compatible install configure:3356: result: /usr/bin/install -c configure:3367: checking whether make sets $(MAKE) configure:3387: result: yes configure:3437: checking for ranlib configure:3453: found /usr/bin/ranlib configure:3464: result: ranlib configure:3476: checking whether ln -s works configure:3480: result: yes configure:3541: checking build system type configure:3559: result: x86_64-unknown-linux-gnu configure:3567: checking host system type configure:3581: result: x86_64-unknown-linux-gnu configure:3589: checking for a sed that does not truncate output configure:3643: result: /bin/sed configure:3646: checking for egrep configure:3656: result: grep -E configure:3672: checking for ld used by icc configure:3739: result: /usr/bin/ld configure:3748: checking if the linker (/usr/bin/ld) is GNU ld configure:3763: result: yes configure:3768: checking for /usr/bin/ld option to reload object files configure:3775: result: -r configure:3784: checking for BSD-compatible nm configure:3826: result: /usr/bin/nm -B configure:3830: checking how to recognise dependent libraries configure:4013: result: pass_all configure:4098: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 configure:4101: $? = 0 configure:4227: checking how to run the C preprocessor configure:4262: icc -E conftest.c configure:4268: $? = 0 configure:4300: icc -E conftest.c conftest.c(11): error #5: could not open source file "ac_nonexistent.h" #include ^ configure:4306: $? = 2 configure: failed program was: | /* confdefs.h. */ | | #define PACKAGE_NAME "" | #define PACKAGE_TARNAME "" | #define PACKAGE_VERSION "" | #define PACKAGE_STRING "" | #define PACKAGE_BUGREPORT "" | #define PACKAGE "fftw" | #define VERSION "2.1.5" | /* end confdefs.h. */ | #include configure:4345: result: icc -E configure:4369: icc -E conftest.c configure:4375: $? = 0 configure:4407: icc -E conftest.c conftest.c(11): error #5: could not open source file "ac_nonexistent.h" #include ^ configure:4413: $? = 2 configure: failed program was: | /* confdefs.h. */ | | #define PACKAGE_NAME "" | #define PACKAGE_TARNAME "" | #define PACKAGE_VERSION "" | #define PACKAGE_STRING "" | #define PACKAGE_BUGREPORT "" | #define PACKAGE "fftw" | #define VERSION "2.1.5" | /* end confdefs.h. */ | #include configure:4457: checking for ANSI C header files configure:4482: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 configure:4488: $? = 0 configure:4492: test -z || test ! -s conftest.err configure:4495: $? = 0 configure:4498: test -s conftest.o configure:4501: $? = 0 configure:4590: icc -o conftest -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 configure:4593: $? = 0 configure:4595: ./conftest configure:4598: $? = 0 configure:4613: result: yes configure:4637: checking for sys/types.h configure:4653: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 configure:4659: $? = 0 configure:4663: test -z || test ! -s conftest.err configure:4666: $? = 0 configure:4669: test -s conftest.o configure:4672: $? = 0 configure:4683: result: yes configure:4637: checking for sys/stat.h configure:4653: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 configure:4659: $? = 0 configure:4663: test -z || test ! -s conftest.err configure:4666: $? = 0 configure:4669: test -s conftest.o configure:4672: $? = 0 configure:4683: result: yes configure:4637: checking for stdlib.h configure:4653: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 configure:4659: $? = 0 configure:4663: test -z || test ! -s conftest.err configure:4666: $? = 0 configure:4669: test -s conftest.o configure:4672: $? = 0 configure:4683: result: yes configure:4637: checking for string.h configure:4653: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 configure:4659: $? = 0 configure:4663: test -z || test ! -s conftest.err configure:4666: $? = 0 configure:4669: test -s conftest.o configure:4672: $? = 0 configure:4683: result: yes configure:4637: checking for memory.h configure:4653: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 configure:4659: $? = 0 configure:4663: test -z || test ! -s conftest.err configure:4666: $? = 0 configure:4669: test -s conftest.o configure:4672: $? = 0 configure:4683: result: yes configure:4637: checking for strings.h configure:4653: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 configure:4659: $? = 0 configure:4663: test -z || test ! -s conftest.err configure:4666: $? = 0 configure:4669: test -s conftest.o configure:4672: $? = 0 configure:4683: result: yes configure:4637: checking for inttypes.h configure:4653: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 configure:4659: $? = 0 configure:4663: test -z || test ! -s conftest.err configure:4666: $? = 0 configure:4669: test -s conftest.o configure:4672: $? = 0 configure:4683: result: yes configure:4637: checking for stdint.h configure:4653: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 configure:4659: $? = 0 configure:4663: test -z || test ! -s conftest.err configure:4666: $? = 0 configure:4669: test -s conftest.o configure:4672: $? = 0 configure:4683: result: yes configure:4637: checking for unistd.h configure:4653: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 configure:4659: $? = 0 configure:4663: test -z || test ! -s conftest.err configure:4666: $? = 0 configure:4669: test -s conftest.o configure:4672: $? = 0 configure:4683: result: yes configure:4709: checking dlfcn.h usability configure:4721: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 configure:4727: $? = 0 configure:4731: test -z || test ! -s conftest.err configure:4734: $? = 0 configure:4737: test -s conftest.o configure:4740: $? = 0 configure:4750: result: yes configure:4754: checking dlfcn.h presence configure:4764: icc -E conftest.c configure:4770: $? = 0 configure:4790: result: yes configure:4825: checking for dlfcn.h configure:4832: result: yes configure:4897: checking for g++ configure:4913: found /usr/bin/g++ configure:4923: result: g++ configure:4939: checking for C++ compiler version configure:4942: g++ --version &5 g++ (GCC) 3.4.6 20060404 (Red Hat 3.4.6-8) Copyright (C) 2006 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:4945: $? = 0 configure:4947: g++ -v &5 Reading specs from /usr/lib/gcc/x86_64-redhat-linux/3.4.6/specs Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared --enable-threads=posix --disable-checking --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-java-awt=gtk --host=x86_64-redhat-linux Thread model: posix gcc version 3.4.6 20060404 (Red Hat 3.4.6-8) configure:4950: $? = 0 configure:4952: g++ -V &5 g++: `-V' option must have argument configure:4955: $? = 1 configure:4958: checking whether we are using the GNU C++ compiler configure:4982: g++ -c conftest.cc >&5 configure:4988: $? = 0 configure:4992: test -z || test ! -s conftest.err configure:4995: $? = 0 configure:4998: test -s conftest.o configure:5001: $? = 0 configure:5014: result: yes configure:5020: checking whether g++ accepts -g configure:5041: g++ -c -g conftest.cc >&5 configure:5047: $? = 0 configure:5051: test -z || test ! -s conftest.err configure:5054: $? = 0 configure:5057: test -s conftest.o configure:5060: $? = 0 configure:5071: result: yes configure:5113: g++ -c -g -O2 conftest.cc >&5 configure:5119: $? = 0 configure:5123: test -z || test ! -s conftest.err configure:5126: $? = 0 configure:5129: test -s conftest.o configure:5132: $? = 0 configure:5158: g++ -c -g -O2 conftest.cc >&5 conftest.cc: In function `int main()': conftest.cc:26: error: `exit' was not declared in this scope configure:5164: $? = 1 configure: failed program was: | /* confdefs.h. */ | | #define PACKAGE_NAME "" | #define PACKAGE_TARNAME "" | #define PACKAGE_VERSION "" | #define PACKAGE_STRING "" | #define PACKAGE_BUGREPORT "" | #define PACKAGE "fftw" | #define VERSION "2.1.5" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | /* end confdefs.h. */ | | int | main () | { | exit (42); | ; | return 0; | } configure:5113: g++ -c -g -O2 conftest.cc >&5 configure:5119: $? = 0 configure:5123: test -z || test ! -s conftest.err configure:5126: $? = 0 configure:5129: test -s conftest.o configure:5132: $? = 0 configure:5158: g++ -c -g -O2 conftest.cc >&5 configure:5164: $? = 0 configure:5168: test -z || test ! -s conftest.err configure:5171: $? = 0 configure:5174: test -s conftest.o configure:5177: $? = 0 configure:5202: checking dependency style of g++ configure:5285: result: gcc3 configure:5307: checking how to run the C++ preprocessor configure:5338: g++ -E conftest.cc configure:5344: $? = 0 configure:5376: g++ -E conftest.cc conftest.cc:25:28: ac_nonexistent.h: No such file or directory configure:5382: $? = 1 configure: failed program was: | /* confdefs.h. */ | | #define PACKAGE_NAME "" | #define PACKAGE_TARNAME "" | #define PACKAGE_VERSION "" | #define PACKAGE_STRING "" | #define PACKAGE_BUGREPORT "" | #define PACKAGE "fftw" | #define VERSION "2.1.5" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #ifdef __cplusplus | extern "C" void std::exit (int) throw (); using std::exit; | #endif | /* end confdefs.h. */ | #include configure:5421: result: g++ -E configure:5445: g++ -E conftest.cc configure:5451: $? = 0 configure:5483: g++ -E conftest.cc conftest.cc:25:28: ac_nonexistent.h: No such file or directory configure:5489: $? = 1 configure: failed program was: | /* confdefs.h. */ | | #define PACKAGE_NAME "" | #define PACKAGE_TARNAME "" | #define PACKAGE_VERSION "" | #define PACKAGE_STRING "" | #define PACKAGE_BUGREPORT "" | #define PACKAGE "fftw" | #define VERSION "2.1.5" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #ifdef __cplusplus | extern "C" void std::exit (int) throw (); using std::exit; | #endif | /* end confdefs.h. */ | #include configure:5625: checking for Fortran 77 compiler version configure:5628: ifort --version &5 ifort (IFORT) 11.0 20090318 Copyright (C) 1985-2009 Intel Corporation. All rights reserved. configure:5631: $? = 0 configure:5633: ifort -v &5 Version 11.0 configure:5636: $? = 0 configure:5638: ifort -V &5 Intel(R) Fortran Intel(R) 64 Compiler Professional for applications running on Intel(R) 64, Version 11.0 Build 20090318 Package ID: l_cprof_p_11.0.083 Copyright (C) 1985-2009 Intel Corporation. All rights reserved. configure:5641: $? = 0 configure:5649: checking whether we are using the GNU Fortran 77 compiler configure:5663: ifort -c -ip -O3 -xHost conftest.F >&5 conftest.F(3): error #5082: Syntax error, found END-OF-STATEMENT when expecting one of: ( %% : . = => choke me ---------------^ conftest.F(3): error #6218: This statement is positioned incorrectly and/or has syntax errors. choke me ---------------^ compilation aborted for conftest.F (code 1) configure:5669: $? = 1 configure: failed program was: | program main | #ifndef __GNUC__ | choke me | #endif | | end configure:5695: result: no configure:5701: checking whether ifort accepts -g configure:5713: ifort -c -g conftest.f >&5 configure:5719: $? = 0 configure:5723: test -z || test ! -s conftest.err configure:5726: $? = 0 configure:5729: test -s conftest.o configure:5732: $? = 0 configure:5744: result: yes configure:5774: checking the maximum length of command line arguments configure:5839: result: 32768 configure:5850: checking command to parse /usr/bin/nm -B output from icc object configure:5939: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 configure:5942: $? = 0 configure:5946: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\(\)\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2\3 \3/p' \> conftest.nm configure:5949: $? = 0 configure:6001: icc -o conftest -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c conftstm.o >&5 configure:6004: $? = 0 configure:6042: result: ok configure:6046: checking for objdir configure:6061: result: .libs configure:6151: checking for ar configure:6167: found /usr/bin/ar configure:6178: result: ar configure:6231: checking for ranlib configure:6258: result: ranlib configure:6311: checking for strip configure:6327: found /usr/bin/strip configure:6338: result: strip configure:6600: checking if icc static flag works configure:6623: result: yes configure:6641: checking if icc supports -fno-rtti -fno-exceptions configure:6659: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 -fno-rtti -fno-exceptions conftest.c >&5 configure:6663: $? = 0 configure:6674: result: yes configure:6689: checking for icc option to produce PIC configure:6866: result: -fPIC configure:6874: checking if icc PIC flag -fPIC works configure:6892: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 -fPIC -DPIC conftest.c >&5 configure:6896: $? = 0 configure:6907: result: yes configure:6931: checking if icc supports -c -o file.o configure:6952: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 -o out/conftest2.o conftest.c >&5 configure:6956: $? = 0 configure:6976: result: yes configure:7002: checking whether the icc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:7850: result: yes configure:7921: checking dynamic linker characteristics configure:8287: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 configure:8290: $? = 0 configure:8482: result: GNU/Linux ld.so configure:8486: checking how to hardcode library paths into programs configure:8511: result: immediate configure:8525: checking whether stripping libraries is possible configure:8530: result: yes configure:9360: checking if libtool supports shared libraries configure:9362: result: yes configure:9365: checking whether to build shared libraries configure:9423: result: no configure:9426: checking whether to build static libraries configure:9430: result: yes configure:9522: creating libtool configure:10069: checking for ld used by g++ configure:10136: result: /usr/bin/ld -m elf_x86_64 configure:10145: checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld configure:10160: result: yes configure:10211: checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:11039: result: yes configure:11057: g++ -c -g -O2 conftest.cc >&5 configure:11060: $? = 0 configure:11156: checking for g++ option to produce PIC configure:11408: result: -fPIC configure:11416: checking if g++ PIC flag -fPIC works configure:11434: g++ -c -g -O2 -fPIC -DPIC conftest.cc >&5 configure:11438: $? = 0 configure:11449: result: yes configure:11473: checking if g++ supports -c -o file.o configure:11494: g++ -c -g -O2 -o out/conftest2.o conftest.cc >&5 configure:11498: $? = 0 configure:11518: result: yes configure:11544: checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:11569: result: yes configure:11640: checking dynamic linker characteristics configure:12006: g++ -c -g -O2 conftest.cc >&5 configure:12009: $? = 0 configure:12201: result: GNU/Linux ld.so configure:12205: checking how to hardcode library paths into programs configure:12230: result: immediate configure:12244: checking whether stripping libraries is possible configure:12249: result: yes configure:13556: checking if libtool supports shared libraries configure:13558: result: yes configure:13561: checking whether to build shared libraries configure:13579: result: no configure:13582: checking whether to build static libraries configure:13586: result: yes configure:13598: checking for ifort option to produce PIC configure:13775: result: -fPIC configure:13783: checking if ifort PIC flag -fPIC works configure:13801: ifort -c -ip -O3 -xHost -fPIC conftest.f >&5 configure:13805: $? = 0 configure:13816: result: yes configure:13840: checking if ifort supports -c -o file.o configure:13861: ifort -c -ip -O3 -xHost -o out/conftest2.o conftest.f >&5 configure:13865: $? = 0 configure:13885: result: yes configure:13911: checking whether the ifort linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:14739: result: yes configure:14810: checking dynamic linker characteristics configure:15176: ifort -c -ip -O3 -xHost conftest.f >&5 : warning #5117: Bad # preprocessor line configure:15179: $? = 0 configure:15371: result: GNU/Linux ld.so configure:15375: checking how to hardcode library paths into programs configure:15400: result: immediate configure:15414: checking whether stripping libraries is possible configure:15419: result: yes configure:19528: checking for perl configure:19544: found /usr/bin/perl configure:19555: result: perl configure:19658: checking for Fortran 77 compiler version configure:19661: ifort --version &5 ifort (IFORT) 11.0 20090318 Copyright (C) 1985-2009 Intel Corporation. All rights reserved. configure:19664: $? = 0 configure:19666: ifort -v &5 Version 11.0 configure:19669: $? = 0 configure:19671: ifort -V &5 Intel(R) Fortran Intel(R) 64 Compiler Professional for applications running on Intel(R) 64, Version 11.0 Build 20090318 Package ID: l_cprof_p_11.0.083 Copyright (C) 1985-2009 Intel Corporation. All rights reserved. configure:19674: $? = 0 configure:19682: checking whether we are using the GNU Fortran 77 compiler configure:19728: result: no configure:19734: checking whether ifort accepts -g configure:19777: result: yes configure:19811: checking how to get verbose linking output from ifort configure:19822: ifort -c -ip -O3 -xHost conftest.f >&5 configure:19828: $? = 0 configure:19832: test -z || test ! -s conftest.err configure:19835: $? = 0 configure:19838: test -s conftest.o configure:19841: $? = 0 configure:19858: ifort -o conftest -ip -O3 -xHost -v conftest.f >&5 Version 11.0 /opt/intel/Compiler/11.0/083/bin/intel64/fortcom -D__INTEL_COMPILER=1100 -D_MT -D__ELF__ -D__INTEL_COMPILER_BUILD_DATE=20090318 -D__unix__ -D__unix -D__linux__ -D__linux -D__gnu_linux__ -Dunix -Dlinux -D__x86_64 -D__x86_64__ -mGLOB_pack_sort_init_list -I. -I/opt/intel/Compiler/11.0/083/include/intel64 -I/opt/intel/Compiler/11.0/083/include -I/usr/local/include -I/usr/include -I/usr/lib/gcc/x86_64-redhat-linux/3.4.6/include -O3 -mP1OPT_version=11.0-intel64 -mGLOB_diag_file=/tmp/ifortZwZHpO.diag -mGLOB_source_language=GLOB_SOURCE_LANGUAGE_F90 -mGLOB_tune_for_fort -mGLOB_use_fort_dope_vector -mP2OPT_static_promotion -mP1OPT_print_version=FALSE -mP3OPT_use_mspp_call_convention -mCG_use_gas_got_workaround=F -mP2OPT_align_option_used=TRUE "-mGLOB_options_string=-o conftest -ip -O3 -xHost -v" -mGLOB_cxx_limited_range=FALSE -mP2OPT_eh_nirvana -mGLOB_as_output_backup_file_name=/tmp/ifortk9chjZas_.s -mIPOPT_activate -mGLOB_machine_model=GLOB_MACHINE_MODEL_EFI2 -mGLOB_extended_instructions=0x100 -mGLOB_advanced_optim=TRUE -mP2OPT_subs_out_of_bound=FALSE -mGLOB_ansi_alias -mIPOPT_args_in_regs=0 -mPGOPTI_value_profile_use=T -mGLOB_opt_level=3 -mP2OPT_hlo_level=3 -mP2OPT_hlo -mPAROPT_par_report=1 -mIPOPT_obj_output_file_name=/tmp/ifortZwZHpO.o "-mGLOB_linker_version=2.15.92.0.2 20040927" -mP3OPT_asm_target=P3OPT_ASM_TARGET_GAS -mGLOB_obj_output_file=/tmp/ifortZwZHpO.o -mGLOB_source_dialect=GLOB_SOURCE_DIALECT_FORTRAN -mP1OPT_source_file_name=conftest.f conftest.f ld /usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/3.4.6/crtbegin.o --eh-frame-hdr -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /opt/intel/Compiler/11.0/083/lib/intel64/for_main.o /tmp/ifortZwZHpO.o -L/opt/intel/Compiler/11.0/083/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../.. -L/lib64 -L/lib -L/usr/lib64 -L/usr/lib -Bstatic -lifport -lifcore -limf -lsvml -Bdynamic -lm -Bstatic -lipgo -lirc -Bdynamic -lpthread -lc -lgcc_s -lgcc -Bstatic -lirc_s -Bdynamic -ldl -lc /usr/lib/gcc/x86_64-redhat-linux/3.4.6/crtend.o /usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../../../lib64/crtn.o rm /tmp/ifortb6lIwDlibgcc rm /tmp/ifortYR62XIgnudirs rm /tmp/ifortEhXnRTgas rm /tmp/ifortk9chjZas_.s rm /tmp/ifortM22aL4ldashv rm /tmp/ifortY6Iwdaarg rm /tmp/ifortnnryOfgnudirs rm /tmp/ifortZwZHpO.o configure:19913: result: -v configure:19915: checking for Fortran libraries of ifort configure:20097: result: -L/opt/intel/Compiler/11.0/083/lib/intel64/ -lifport -lifcore -lsvml configure:20113: checking for dummy main to link with Fortran libraries configure:20152: icc -o conftest -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c -L/opt/intel/Compiler/11.0/083/lib/intel64/ -lifport -lifcore -lsvml >&5 /opt/intel/Compiler/11.0/083/lib/intel64/libimf.so: warning: warning: feupdateenv is not implemented and will always fail configure:20158: $? = 0 configure:20162: test -z || test ! -s conftest.err configure:20165: $? = 0 configure:20168: test -s conftest configure:20171: $? = 0 configure:20249: result: none configure:20289: checking for Fortran name-mangling scheme configure:20303: ifort -c -ip -O3 -xHost conftest.f >&5 configure:20309: $? = 0 configure:20313: test -z || test ! -s conftest.err configure:20316: $? = 0 configure:20319: test -s conftest.o configure:20322: $? = 0 configure:20369: icc -o conftest -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c cfortran_test.o -L/opt/intel/Compiler/11.0/083/lib/intel64/ -lifport -lifcore -lsvml >&5 /opt/intel/Compiler/11.0/083/lib/intel64/libimf.so: warning: warning: feupdateenv is not implemented and will always fail /tmp/iccmg3ojG.o(.text+0x2b): In function `main': : undefined reference to `foobar' configure:20375: $? = 1 configure: failed program was: | /* confdefs.h. */ | | #define PACKAGE_NAME "" | #define PACKAGE_TARNAME "" | #define PACKAGE_VERSION "" | #define PACKAGE_STRING "" | #define PACKAGE_BUGREPORT "" | #define PACKAGE "fftw" | #define VERSION "2.1.5" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #ifdef __cplusplus | extern "C" void std::exit (int) throw (); using std::exit; | #endif | /* end confdefs.h. */ | | /* Override any gcc2 internal prototype to avoid an error. */ | #ifdef __cplusplus | extern "C" | #endif | /* We use char because int might match the return type of a gcc2 | builtin and then its argument prototype would still apply. */ | char foobar (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main () | { | foobar (); | ; | return 0; | } configure:20369: icc -o conftest -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c cfortran_test.o -L/opt/intel/Compiler/11.0/083/lib/intel64/ -lifport -lifcore -lsvml >&5 /opt/intel/Compiler/11.0/083/lib/intel64/libimf.so: warning: warning: feupdateenv is not implemented and will always fail configure:20375: $? = 0 configure:20379: test -z || test ! -s conftest.err configure:20382: $? = 0 configure:20385: test -s conftest configure:20388: $? = 0 configure:20456: icc -o conftest -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c cfortran_test.o -L/opt/intel/Compiler/11.0/083/lib/intel64/ -lifport -lifcore -lsvml >&5 /opt/intel/Compiler/11.0/083/lib/intel64/libimf.so: warning: warning: feupdateenv is not implemented and will always fail configure:20462: $? = 0 configure:20466: test -z || test ! -s conftest.err configure:20469: $? = 0 configure:20472: test -s conftest configure:20475: $? = 0 configure:20525: result: lower case, underscore, no extra underscore configure:21206: checking whether icc accepts -mpreferred-stack-boundary=4 configure:21220: result: no configure:21339: checking for sqrt in -lm configure:21377: icc -o conftest -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c -lm >&5 configure:21383: $? = 0 configure:21387: test -z || test ! -s conftest.err configure:21390: $? = 0 configure:21393: test -s conftest configure:21396: $? = 0 configure:21409: result: yes configure:21421: checking for ANSI C header files configure:21585: result: yes configure:21612: checking sys/time.h usability configure:21624: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 configure:21630: $? = 0 configure:21634: test -z || test ! -s conftest.err configure:21637: $? = 0 configure:21640: test -s conftest.o configure:21643: $? = 0 configure:21653: result: yes configure:21657: checking sys/time.h presence configure:21667: icc -E conftest.c configure:21673: $? = 0 configure:21693: result: yes configure:21728: checking for sys/time.h configure:21735: result: yes configure:21603: checking for unistd.h configure:21608: result: yes configure:21612: checking getopt.h usability configure:21624: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 configure:21630: $? = 0 configure:21634: test -z || test ! -s conftest.err configure:21637: $? = 0 configure:21640: test -s conftest.o configure:21643: $? = 0 configure:21653: result: yes configure:21657: checking getopt.h presence configure:21667: icc -E conftest.c configure:21673: $? = 0 configure:21693: result: yes configure:21728: checking for getopt.h configure:21735: result: yes configure:21612: checking malloc.h usability configure:21624: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 configure:21630: $? = 0 configure:21634: test -z || test ! -s conftest.err configure:21637: $? = 0 configure:21640: test -s conftest.o configure:21643: $? = 0 configure:21653: result: yes configure:21657: checking malloc.h presence configure:21667: icc -E conftest.c configure:21673: $? = 0 configure:21693: result: yes configure:21728: checking for malloc.h configure:21735: result: yes configure:21749: checking for an ANSI C-conforming const configure:21824: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 conftest.c(71): warning #592: variable "t" is used before its value is set *t++ = 0; ^ conftest.c(86): warning #592: variable "b" is used before its value is set struct s *b; b->j = 5; ^ configure:21830: $? = 0 configure:21834: test -z || test ! -s conftest.err configure:21837: $? = 0 configure:21840: test -s conftest.o configure:21843: $? = 0 configure:21854: result: yes configure:21864: checking for size_t configure:21896: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 conftest.c(79): warning #279: controlling expression is constant if ((size_t *) 0) ^ configure:21902: $? = 0 configure:21906: test -z || test ! -s conftest.err configure:21909: $? = 0 configure:21912: test -s conftest.o configure:21915: $? = 0 configure:21926: result: yes configure:21938: checking whether time.h and sys/time.h may both be included configure:21971: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 conftest.c(49): warning #279: controlling expression is constant if ((struct tm *) 0) ^ configure:21977: $? = 0 configure:21981: test -z || test ! -s conftest.err configure:21984: $? = 0 configure:21987: test -s conftest.o configure:21990: $? = 0 configure:22001: result: yes configure:22028: checking for working alloca.h configure:22057: icc -o conftest -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c -lm >&5 configure:22063: $? = 0 configure:22067: test -z || test ! -s conftest.err configure:22070: $? = 0 configure:22073: test -s conftest configure:22076: $? = 0 configure:22088: result: yes configure:22098: checking for alloca configure:22147: icc -o conftest -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c -lm >&5 configure:22153: $? = 0 configure:22157: test -z || test ! -s conftest.err configure:22160: $? = 0 configure:22163: test -s conftest configure:22166: $? = 0 configure:22178: result: yes configure:22413: checking for gettimeofday configure:22478: icc -o conftest -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c -lm >&5 configure:22484: $? = 0 configure:22488: test -z || test ! -s conftest.err configure:22491: $? = 0 configure:22494: test -s conftest configure:22497: $? = 0 configure:22509: result: yes configure:22523: checking for BSDgettimeofday configure:22588: icc -o conftest -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c -lm >&5 /tmp/icci9Uxp1.o(.text+0x29): In function `main': : undefined reference to `BSDgettimeofday' /tmp/icci9Uxp1.o(.data+0x0): undefined reference to `BSDgettimeofday' configure:22594: $? = 1 configure: failed program was: | /* confdefs.h. */ | | #define PACKAGE_NAME "" | #define PACKAGE_TARNAME "" | #define PACKAGE_VERSION "" | #define PACKAGE_STRING "" | #define PACKAGE_BUGREPORT "" | #define PACKAGE "fftw" | #define VERSION "2.1.5" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #ifdef __cplusplus | extern "C" void std::exit (int) throw (); using std::exit; | #endif | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define FFTW_VERSION "2.1.5" | #define HAVE_LIBM 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_GETOPT_H 1 | #define HAVE_MALLOC_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_GETTIMEOFDAY 1 | /* end confdefs.h. */ | /* Define BSDgettimeofday to an innocuous variant, in case declares BSDgettimeofday. | For example, HP-UX 11i declares gettimeofday. */ | #define BSDgettimeofday innocuous_BSDgettimeofday | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char BSDgettimeofday (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef BSDgettimeofday | | /* Override any gcc2 internal prototype to avoid an error. */ | #ifdef __cplusplus | extern "C" | { | #endif | /* We use char because int might match the return type of a gcc2 | builtin and then its argument prototype would still apply. */ | char BSDgettimeofday (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined (__stub_BSDgettimeofday) || defined (__stub___BSDgettimeofday) | choke me | #else | char (*f) () = BSDgettimeofday; | #endif | #ifdef __cplusplus | } | #endif | | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main () | { | return f != BSDgettimeofday; | ; | return 0; | } configure:22619: result: no configure:22633: checking for gethrtime configure:22698: icc -o conftest -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c -lm >&5 /tmp/iccH4AxFb.o(.text+0x29): In function `main': : undefined reference to `gethrtime' /tmp/iccH4AxFb.o(.data+0x0): undefined reference to `gethrtime' configure:22704: $? = 1 configure: failed program was: | /* confdefs.h. */ | | #define PACKAGE_NAME "" | #define PACKAGE_TARNAME "" | #define PACKAGE_VERSION "" | #define PACKAGE_STRING "" | #define PACKAGE_BUGREPORT "" | #define PACKAGE "fftw" | #define VERSION "2.1.5" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #ifdef __cplusplus | extern "C" void std::exit (int) throw (); using std::exit; | #endif | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define FFTW_VERSION "2.1.5" | #define HAVE_LIBM 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_GETOPT_H 1 | #define HAVE_MALLOC_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_GETTIMEOFDAY 1 | /* end confdefs.h. */ | /* Define gethrtime to an innocuous variant, in case declares gethrtime. | For example, HP-UX 11i declares gettimeofday. */ | #define gethrtime innocuous_gethrtime | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char gethrtime (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef gethrtime | | /* Override any gcc2 internal prototype to avoid an error. */ | #ifdef __cplusplus | extern "C" | { | #endif | /* We use char because int might match the return type of a gcc2 | builtin and then its argument prototype would still apply. */ | char gethrtime (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined (__stub_gethrtime) || defined (__stub___gethrtime) | choke me | #else | char (*f) () = gethrtime; | #endif | #ifdef __cplusplus | } | #endif | | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main () | { | return f != gethrtime; | ; | return 0; | } configure:22729: result: no configure:22743: checking for getopt configure:22808: icc -o conftest -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c -lm >&5 configure:22814: $? = 0 configure:22818: test -z || test ! -s conftest.err configure:22821: $? = 0 configure:22824: test -s conftest configure:22827: $? = 0 configure:22839: result: yes configure:22853: checking for getopt_long configure:22918: icc -o conftest -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c -lm >&5 configure:22924: $? = 0 configure:22928: test -z || test ! -s conftest.err configure:22931: $? = 0 configure:22934: test -s conftest configure:22937: $? = 0 configure:22949: result: yes configure:22960: checking for isnan configure:22987: icc -o conftest -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c -lm >&5 configure:22993: $? = 0 configure:22997: test -z || test ! -s conftest.err configure:23000: $? = 0 configure:23003: test -s conftest configure:23006: $? = 0 configure:23023: result: yes configure:23028: checking for hrtime_t configure:23058: icc -o conftest -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c -lm >&5 conftest.c(57): error: identifier "hrtime_t" is undefined hrtime_t foobar; ^ compilation aborted for conftest.c (code 2) configure:23064: $? = 2 configure: failed program was: | /* confdefs.h. */ | | #define PACKAGE_NAME "" | #define PACKAGE_TARNAME "" | #define PACKAGE_VERSION "" | #define PACKAGE_STRING "" | #define PACKAGE_BUGREPORT "" | #define PACKAGE "fftw" | #define VERSION "2.1.5" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #ifdef __cplusplus | extern "C" void std::exit (int) throw (); using std::exit; | #endif | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define FFTW_VERSION "2.1.5" | #define HAVE_LIBM 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_GETOPT_H 1 | #define HAVE_MALLOC_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_GETOPT 1 | #define HAVE_GETOPT_LONG 1 | #define HAVE_ISNAN 1 | /* end confdefs.h. */ | | #ifdef HAVE_SYS_TIME_H | #include | #endif | | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main () | { | hrtime_t foobar; | ; | return 0; | } configure:23094: result: no configure:23097: checking for int configure:23129: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 conftest.c(86): warning #279: controlling expression is constant if ((int *) 0) ^ configure:23135: $? = 0 configure:23139: test -z || test ! -s conftest.err configure:23142: $? = 0 configure:23145: test -s conftest.o configure:23148: $? = 0 configure:23159: result: yes configure:23162: checking size of int configure:23529: icc -o conftest -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c -lm >&5 configure:23532: $? = 0 configure:23534: ./conftest configure:23537: $? = 0 configure:23560: result: 4 configure:23567: checking for long long configure:23599: icc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c >&5 conftest.c(87): warning #279: controlling expression is constant if ((long long *) 0) ^ configure:23605: $? = 0 configure:23609: test -z || test ! -s conftest.err configure:23612: $? = 0 configure:23615: test -s conftest.o configure:23618: $? = 0 configure:23629: result: yes configure:23632: checking size of long long configure:23999: icc -o conftest -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2 conftest.c -lm >&5 configure:24002: $? = 0 configure:24004: ./conftest configure:24007: $? = 0 configure:24030: result: 8 configure:24055: checking whether icc accepts "-fkeep-programmers-inline" configure:24069: result: no configure:24081: checking whether icc accepts "-vomit-frame-pointer" configure:24095: result: no configure:26461: creating ./config.status ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-unknown-linux-gnu ac_cv_build_alias=x86_64-unknown-linux-gnu ac_cv_c_compiler_gnu=yes ac_cv_c_const=yes ac_cv_cxx_compiler_gnu=yes ac_cv_env_CC_set=set ac_cv_env_CC_value=icc ac_cv_env_CFLAGS_set=set ac_cv_env_CFLAGS_value=' -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2' ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXCPP_set= ac_cv_env_CXXCPP_value= ac_cv_env_CXXFLAGS_set= ac_cv_env_CXXFLAGS_value= ac_cv_env_CXX_set= ac_cv_env_CXX_value= ac_cv_env_F77_set=set ac_cv_env_F77_value=ifort ac_cv_env_FFLAGS_set=set ac_cv_env_FFLAGS_value=' -ip -O3 -xHost' ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_exeext= ac_cv_f77_compiler_gnu=no ac_cv_f77_dummy_main=none ac_cv_f77_libs='-L/opt/intel/Compiler/11.0/083/lib/intel64/ -lifport -lifcore -lsvml' ac_cv_f77_mangling='lower case, underscore, no extra underscore' ac_cv_fortran_dummy_main=none ac_cv_func_BSDgettimeofday=no ac_cv_func_alloca_works=yes ac_cv_func_gethrtime=no ac_cv_func_getopt=yes ac_cv_func_getopt_long=yes ac_cv_func_gettimeofday=yes ac_cv_header_dlfcn_h=yes ac_cv_header_getopt_h=yes ac_cv_header_inttypes_h=yes ac_cv_header_malloc_h=yes ac_cv_header_memory_h=yes ac_cv_header_stdc=yes ac_cv_header_stdint_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_time_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_time=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-unknown-linux-gnu ac_cv_host_alias=x86_64-unknown-linux-gnu ac_cv_lib_m_sqrt=yes ac_cv_objext=o ac_cv_path_install='/usr/bin/install -c' ac_cv_prog_AWK=gawk ac_cv_prog_CC=icc ac_cv_prog_CPP='icc -E' ac_cv_prog_CXXCPP='g++ -E' ac_cv_prog_PERL=perl ac_cv_prog_ac_ct_AR=ar ac_cv_prog_ac_ct_CXX=g++ ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_ac_ct_STRIP=strip ac_cv_prog_cc_g=yes ac_cv_prog_cc_stdc= ac_cv_prog_cxx_g=yes ac_cv_prog_egrep='grep -E' ac_cv_prog_f77_g=yes ac_cv_prog_f77_v=-v ac_cv_prog_gcc_2_90=yes ac_cv_prog_make_make_set=yes ac_cv_sizeof_int=4 ac_cv_sizeof_long_long=8 ac_cv_type_int=yes ac_cv_type_long_long=yes ac_cv_type_size_t=yes ac_cv_working_alloca_h=yes am_cv_CC_dependencies_compiler_type=gcc3 am_cv_CXX_dependencies_compiler_type=gcc3 lt_cv_deplibs_check_method=pass_all lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file='/lib/libc.so.6 /lib/libc-2.3.4.so' lt_cv_ld_reload_flag=-r lt_cv_objdir=.libs lt_cv_path_LD=/usr/bin/ld lt_cv_path_LDCXX='/usr/bin/ld -m elf_x86_64' lt_cv_path_NM='/usr/bin/nm -B' lt_cv_path_SED=/bin/sed lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_c_o_CXX=yes lt_cv_prog_compiler_c_o_F77=yes lt_cv_prog_compiler_rtti_exceptions=yes lt_cv_prog_gnu_ld=yes lt_cv_prog_gnu_ldcxx=yes lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\(\)\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2\3 \3/p'\''' lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\) $/ {\"\1\", (lt_ptr) 0},/p'\'' -e '\''s/^[BCDEGRST] \([^ ]*\) \([^ ]*\)$/ {"\2", (lt_ptr) \&\2},/p'\''' lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^. .* \(.*\)$/extern int \1;/p'\''' lt_cv_sys_max_cmd_len=32768 lt_lt_cv_prog_compiler_c_o='"yes"' lt_lt_cv_prog_compiler_c_o_CXX='"yes"' lt_lt_cv_prog_compiler_c_o_F77='"yes"' lt_lt_cv_sys_global_symbol_pipe='"sed -n -e '\''s/^.*[ ]\\([ABCDGIRSTW][ABCDGIRSTW]*\\)[ ][ ]*\\(\\)\\([_A-Za-z][_A-Za-z0-9]*\\)\$/\\1 \\2\\3 \\3/p'\''"' lt_lt_cv_sys_global_symbol_to_c_name_address='"sed -n -e '\''s/^: \\([^ ]*\\) \$/ {\\\"\\1\\\", (lt_ptr) 0},/p'\'' -e '\''s/^[BCDEGRST] \\([^ ]*\\) \\([^ ]*\\)\$/ {\"\\2\", (lt_ptr) \\&\\2},/p'\''"' lt_lt_cv_sys_global_symbol_to_cdecl='"sed -n -e '\''s/^. .* \\(.*\\)\$/extern int \\1;/p'\''"' ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} /programs/amber.git/AmberTools/src/fftw-2.1.5/missing --run aclocal-1.7' ALLOCA='' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='${SHELL} /programs/amber.git/AmberTools/src/fftw-2.1.5/missing --run tar' AR='ar' AUTOCONF='${SHELL} /programs/amber.git/AmberTools/src/fftw-2.1.5/missing --run autoconf' AUTOHEADER='${SHELL} /programs/amber.git/AmberTools/src/fftw-2.1.5/missing --run autoheader' AUTOMAKE='${SHELL} /programs/amber.git/AmberTools/src/fftw-2.1.5/missing --run automake-1.7' AWK='gawk' CC='icc' CCDEPMODE='depmode=gcc3' CFLAGS=' -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -ip -O3 -xHost -DBINTRAJ -DHASGZ -DHASBZ2' CPP='icc -E' CPPFLAGS='' CXX='g++' CXXCPP='g++ -E' CXXDEPMODE='depmode=gcc3' CXXFLAGS='-g -O2' CYGPATH_W='echo' DEFS='-DHAVE_CONFIG_H' DEPDIR='.deps' ECHO='echo' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='grep -E' EXEEXT='' F77='ifort' FFLAGS=' -ip -O3 -xHost' FFTW_MPI_INCLUDELIST='' FFTW_MPI_LIBLIST='' FFTW_MPI_PROGLIST='' FFTW_PREFIX1='d' FFTW_PREFIX='d' FFTW_THREADS_INCLUDELIST='' FFTW_THREADS_LIBLIST='' FFTW_THREADS_PROGLIST='' FLIBS='-L/opt/intel/Compiler/11.0/083/lib/intel64/ -lifport -lifcore -lsvml' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='${SHELL} $(install_sh) -c -s' LDFLAGS='' LIBOBJS='' LIBS='-lm ' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LN_S='ln -s' LTLIBOBJS='' MAKEINFO='${SHELL} /programs/amber.git/AmberTools/src/fftw-2.1.5/missing --run makeinfo' MPICC='icc' MPILIBS='' OBJEXT='o' PACKAGE='fftw' PACKAGE_BUGREPORT='' PACKAGE_NAME='' PACKAGE_STRING='' PACKAGE_TARNAME='' PACKAGE_VERSION='' PATH_SEPARATOR=':' PERL='perl' PTHREAD_CC='' PTHREAD_CFLAGS='' PTHREAD_LIBS='' RANLIB='ranlib' SET_MAKE='' SHARED_VERSION='2.0.7' SHARED_VERSION_INFO='2:7:0' SHELL='/bin/sh' STRIP='strip' THREADLIBS='' VERSION='2.1.5' ac_ct_AR='ar' ac_ct_CC='' ac_ct_CXX='g++' ac_ct_F77='' ac_ct_RANLIB='ranlib' ac_ct_STRIP='strip' am__fastdepCC_FALSE='#' am__fastdepCC_TRUE='' am__fastdepCXX_FALSE='#' am__fastdepCXX_TRUE='' am__include='include' am__leading_dot='.' am__quote='' bindir='${exec_prefix}/bin' build='x86_64-unknown-linux-gnu' build_alias='' build_cpu='x86_64' build_os='linux-gnu' build_vendor='unknown' datadir='${prefix}/share' exec_prefix='${prefix}' host='x86_64-unknown-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='unknown' includedir='${prefix}/include' infodir='${prefix}/info' install_sh='/programs/amber.git/AmberTools/src/fftw-2.1.5/install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localstatedir='${prefix}/var' mandir='${prefix}/man' oldincludedir='/usr/include' prefix='/programs/amber.git' program_transform_name='s,x,x,' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='${prefix}/etc' target_alias='' ## ----------- ## ## confdefs.h. ## ## ----------- ## #define F77_FUNC(name,NAME) name ## _ #define F77_FUNC_(name,NAME) name ## _ #define FFTW_VERSION "2.1.5" #define HAVE_ALLOCA 1 #define HAVE_ALLOCA_H 1 #define HAVE_DLFCN_H 1 #define HAVE_GETOPT 1 #define HAVE_GETOPT_H 1 #define HAVE_GETOPT_LONG 1 #define HAVE_GETTIMEOFDAY 1 #define HAVE_INTTYPES_H 1 #define HAVE_ISNAN 1 #define HAVE_LIBM 1 #define HAVE_MALLOC_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STDINT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRINGS_H 1 #define HAVE_STRING_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_SYS_TIME_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_UNISTD_H 1 #define HAVE_UNISTD_H 1 #define PACKAGE "fftw" #define PACKAGE_BUGREPORT "" #define PACKAGE_NAME "" #define PACKAGE_STRING "" #define PACKAGE_TARNAME "" #define PACKAGE_VERSION "" #define SIZEOF_INT 4 #define SIZEOF_LONG_LONG 8 #define STDC_HEADERS 1 #define STDC_HEADERS 1 #define TIME_WITH_SYS_TIME 1 #define VERSION "2.1.5" #endif #ifdef __cplusplus extern "C" void std::exit (int) throw (); using std::exit; configure: exit 0 ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by config.status, which was generated by GNU Autoconf 2.59. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status Makefile on yeats config.status:738: creating Makefile ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by config.status, which was generated by GNU Autoconf 2.59. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status fftw/Makefile depfiles on yeats config.status:738: creating fftw/Makefile config.status:1166: executing depfiles commands ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by config.status, which was generated by GNU Autoconf 2.59. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status fftw/fftw.h on yeats config.status:842: creating fftw/fftw.h config.status:986: fftw/fftw.h is unchanged ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by config.status, which was generated by GNU Autoconf 2.59. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status fftw/config.h on yeats config.status:842: creating fftw/config.h config.status:986: fftw/config.h is unchanged ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by config.status, which was generated by GNU Autoconf 2.59. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status rfftw/Makefile depfiles on yeats config.status:738: creating rfftw/Makefile config.status:1166: executing depfiles commands ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by config.status, which was generated by GNU Autoconf 2.59. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status tests/Makefile depfiles on yeats config.status:738: creating tests/Makefile config.status:1166: executing depfiles commands ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by config.status, which was generated by GNU Autoconf 2.59. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status doc/Makefile on yeats config.status:738: creating doc/Makefile