Re: [AMBER-Developers] AT 1.5 RC Sleap, Rism, and pbsa test failures under Cygwin

From: Mengjuei Hsieh <mengjueh.uci.edu>
Date: Thu, 14 Apr 2011 14:12:24 -0700

Hi,

I can confirm this allocation problem for pbsa_ligand on cygwin. To
solve the problem, I even tried to tweak the registry in hope of
enlarge the allowance of memory usage. Cygwin.XP simply is too limited
to be a production platform...

Nonetheless, please take a look of my commit (bcc33ba) in master
branch. A coarse resolution is used for this test.

Best,

-- 
Mengjuei Hsieh, Molecular Bio & Biochem, University of California Irvine
On Wed, Apr 13, 2011 at 12:13:13PM -0400, Daniel Roe wrote:
> Hi all,
> There are a few test issues under cygwin. I am attaching files with
> the relevant output, below will be a brief summary. There is one
> problem with pbsa, a few with sleap, and a few for Rism. Here are the
> tests which produce an error in the log:
> cd pbsa_ligand && ./Run.t4bnz.min
> Ouput shows:
>  NB-update: atom-based nb list   247422
>  SA Bomb in sa_arc()3: Allocates aborted           0           0
>  5014           0           0
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Received on Thu Apr 14 2011 - 14:30:02 PDT