Re: [AMBER-Developers] AT1.5 5apr11

From: Jason Swails <jason.swails.gmail.com>
Date: Fri, 8 Apr 2011 07:47:13 -0700

I will implement this and see what people think.

Thanks!
Jason

On Fri, Apr 8, 2011 at 4:55 AM, Ben Roberts <ben.roberts.geek.nz> wrote:

> For what it's worth, I agree with Lachele here. I agree with Jason that
> most of the people who have a legitimate reason to have $AMBERHOME set to
> some other value are developers. But, clearly, even we can be flummoxed by
> the symptoms of a bad $AMBERHOME. And what of the "normal user" who commits
> a typo when setting $AMBERHOME?
>
> Having said that, I don't think configure should force the user to set the
> "correct" $AMBERHOME. For which reason, I like Lachele's idea of an "are you
> sure" question.
>
> Ben
>
> --
> For greater security, I support S/MIME encryption.
>
> Sent from my iPhone
>
> On 8/04/2011, at 7:26 AM, "B. Lachele Foley" <lfoley.uga.edu> wrote:
>
> > I typically leave amberhome unset until needed. If not set, the last
> time I did that, the compile fails after a long time with an unhelpful error
> message. I'd rather it die straight away. I would appreciate a check for
> having it set incorrectly that says "are you sure?" if it seems wrong.
> >
> > I'll put that on my list. :-)
> >
> >
> >
> > Sent from my iPhone
> >
> > On Apr 8, 2011, at 12:33 AM, Jason Swails <jason.swails.gmail.com>
> wrote:
> >
> >> On Thu, Apr 7, 2011 at 9:03 PM, B. Lachele Foley <lfoley.uga.edu>
> wrote:
> >>
> >>> I did this, too (but figgered it out). Maybe the compile should fail
> if
> >>> $AMBERHOME is not set? That might do a lot of good in general -- alert
> >>> users to the importance of the setting.
> >>>
> >>
> >> It's easy enough to check that AMBERHOME is set -- but that it's set
> >> correctly? You could drop a check in configure to make sure that it's
> not
> >> set *incorrectly* and force you to either set it properly or unset it,
> but
> >> what's the benefit here? How many users do we think will actually have
> >> cause to set it incorrectly (i.e. at a different amber) besides
> developers?
> >>
> >> All the best,
> >> Jason
> >>
> >>
> >>> Sent from my iPhone
> >>>
> >>> On Apr 7, 2011, at 11:54 PM, Thomas Cheatham <tec3.utah.edu> wrote:
> >>>
> >>>>
> >>>> Re: "my bad" $AMBERHOME not set appropriately...
> >>>>
> >>>> (bad news: experienced user == trusting idiot / not so experienced)
> >>>> (good news: we now know what happens if you do not set $AMBERHOME)
> >>>>
> >>>> I apologize for the hassle and frustration especially as release is
> >>>> pending. What I did was simply extract the tarball, configure intel
> and
> >>>> make install. Nothing else. I uncovered the python issue and then
> >>>> started to blindly dig on multiple machines (like kraken, exposing
> other
> >>>> issues that we still should resolve).
> >>>>
> >>>> I think, however, that Jason nailed it. I wasn't setting $AMBERHOME
> and
> >>>> had assumed that it was automagically set. As this had been set
> >>>> automatically previously, I assumed it was set in the current install
> >>>> scripts and I was incorrect in this assumption. [It may be beneficial
> >>>> behavior however to reset AMBERHOME automatically however!].
> >>>>
> >>>> The only upside is that perhaps we now know what errors people will
> see
> >>> if
> >>>> they do not set AMBERHOME correctly; perhaps this has not been a total
> >>>> waste of all of our time...
> >>>>
> >>>> I went back and did it all over again, this time with $AMBERHOME set
> >>>> appropriately and after the wait for recompile, it all worked fine.
> >>>>
> >>>> --tom
> >>>>
> >>>>
> >>>>
> >>>>
> >>>>
> >>>>
> >>>>
> >>>>
> >>>>
> >>>
> >>>
> >>>
> >>
> >>
> >>
> >>
>
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>



-- 
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Candidate
352-392-4032
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Received on Fri Apr 08 2011 - 08:00:05 PDT
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