On Wed, Mar 3, 2010 at 4:53 PM, Andreas Goetz <agoetz.sdsc.edu> wrote:
> Just as Thorsten said. And gcc 4.2.1 shipping with xcode does not work.
Good to know.
>
> I am not sure what you messed up in your system but installing macports
> and gcc 4.4.3 from macports (package gcc44) works like a charm. At least
> on a fresh OS X system. I would give macports a try:
Tried this: my system needs a makeover :). I'll stop trying on here
until I give it one.
>
> Get macports and then do
> sudo port install gcc44
> sudo port install gcc_select
> sudo gcc_select mp-gcc44
>
> All the best,
> Andy
>
> Thorsten M Woelfle wrote:
>> Try gcc44 from Macport, works for me, and Andi had the same experience ...
>> 4.5 is broken from hpc. ...
>> Any problems, let me know!
>>
>> Greetings,
>> Thorsten
>>
>>
>> On Mar 3, 2010, at 1:18 PM, Jason Swails wrote:
>>
>>> This is being done on Mac OS X 10.6.2 with the gnu compilers. GCC gcc
>>> version 4.2.1 (Apple Inc. build 5646) (dot 1) and gfortran gcc version
>>> 4.5.0 20090910 (experimental) (GCC).
>>>
>>> The above is printout from gfortran -v and gcc -v.
>>>
>>> The gfortran was downloaded on hpc.sourceforge.org or something
>>> (prebuilt binary). The gcc is just the one included with xcode. I'm
>>> not terribly motivated to try macports or fink, as I've had problems
>>> getting either of those to work properly in the past (I think
>>> something about my OS is borked from my early fights with architecture
>>> incompatibilities but I don't have any desire to reformat my machine).
>>> I've never even gotten fink running, and half the packages I try to
>>> install from port end up failing.
>>>
>>> For this reason, I rarely use my laptop for Amber. If nobody else can
>>> reproduce these errors, I will likely give up on amber on mac until I
>>> really give my machine a makeover. There's no point in cluttering the
>>> list with errors that may be unique to my (borked) system.
>>>
>>> With this painful recent attempt at migration to (quasi)64-bit OS by
>>> apple, I must say Linux has taken a big step over OS X in my
>>> preference book.
>>>
>>> All the best,
>>> Jason
>>>
>>> On Wed, Mar 3, 2010 at 3:57 PM, Mengjuei Hsieh <mengjueh.uci.edu> wrote:
>>>> On Wed, Mar 03, 2010 at 03:33:42PM -0500, Jason Swails wrote:
>>>>> I'm guessing it's probably something to do with double-underscores
>>>>> maybe? I do see double-underscores in my error message that I posted
>>>>> here.
>>>> Hi,
>>>>
>>>> I am curious about which version of gnu compiler are you using, this
>>>> might help debugging what happened.
>>>>
>>>> --
>>>> Mengjuei Hsieh, Luo Research Group, Molecular Biology & Biochemistry,
>>>> University of California Irvine.
>>>>
>>>> _______________________________________________
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>>>> AMBER-Developers.ambermd.org
>>>> http://lists.ambermd.org/mailman/listinfo/amber-developers
>>>>
>>>
>>>
>>> --
>>> ---------------------------------------
>>> Jason M. Swails
>>> Quantum Theory Project,
>>> University of Florida
>>> Ph.D. Graduate Student
>>> 352-392-4032
>>>
>>> _______________________________________________
>>> AMBER-Developers mailing list
>>> AMBER-Developers.ambermd.org
>>> http://lists.ambermd.org/mailman/listinfo/amber-developers
>>
>>
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>
> --
> Dr. Andreas W. Goetz
> San Diego Supercomputer Center
> Tel : +1-858-822-4771
> Email: agoetz.sdsc.edu
> Web : www.awgoetz.de
>
> _______________________________________________
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>
Thanks!
Jason
--
---------------------------------------
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Graduate Student
352-392-4032
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Received on Wed Mar 03 2010 - 14:30:02 PST
