Just as Thorsten said. And gcc 4.2.1 shipping with xcode does not work.
I am not sure what you messed up in your system but installing macports
and gcc 4.4.3 from macports (package gcc44) works like a charm. At least
on a fresh OS X system. I would give macports a try:
Get macports and then do
sudo port install gcc44
sudo port install gcc_select
sudo gcc_select mp-gcc44
All the best,
Andy
Thorsten M Woelfle wrote:
> Try gcc44 from Macport, works for me, and Andi had the same experience ...
> 4.5 is broken from hpc. ...
> Any problems, let me know!
>
> Greetings,
> Thorsten
>
>
> On Mar 3, 2010, at 1:18 PM, Jason Swails wrote:
>
>> This is being done on Mac OS X 10.6.2 with the gnu compilers. GCC gcc
>> version 4.2.1 (Apple Inc. build 5646) (dot 1) and gfortran gcc version
>> 4.5.0 20090910 (experimental) (GCC).
>>
>> The above is printout from gfortran -v and gcc -v.
>>
>> The gfortran was downloaded on hpc.sourceforge.org or something
>> (prebuilt binary). The gcc is just the one included with xcode. I'm
>> not terribly motivated to try macports or fink, as I've had problems
>> getting either of those to work properly in the past (I think
>> something about my OS is borked from my early fights with architecture
>> incompatibilities but I don't have any desire to reformat my machine).
>> I've never even gotten fink running, and half the packages I try to
>> install from port end up failing.
>>
>> For this reason, I rarely use my laptop for Amber. If nobody else can
>> reproduce these errors, I will likely give up on amber on mac until I
>> really give my machine a makeover. There's no point in cluttering the
>> list with errors that may be unique to my (borked) system.
>>
>> With this painful recent attempt at migration to (quasi)64-bit OS by
>> apple, I must say Linux has taken a big step over OS X in my
>> preference book.
>>
>> All the best,
>> Jason
>>
>> On Wed, Mar 3, 2010 at 3:57 PM, Mengjuei Hsieh <mengjueh.uci.edu> wrote:
>>> On Wed, Mar 03, 2010 at 03:33:42PM -0500, Jason Swails wrote:
>>>> I'm guessing it's probably something to do with double-underscores
>>>> maybe? I do see double-underscores in my error message that I posted
>>>> here.
>>> Hi,
>>>
>>> I am curious about which version of gnu compiler are you using, this
>>> might help debugging what happened.
>>>
>>> --
>>> Mengjuei Hsieh, Luo Research Group, Molecular Biology & Biochemistry,
>>> University of California Irvine.
>>>
>>> _______________________________________________
>>> AMBER-Developers mailing list
>>> AMBER-Developers.ambermd.org
>>> http://lists.ambermd.org/mailman/listinfo/amber-developers
>>>
>>
>>
>> --
>> ---------------------------------------
>> Jason M. Swails
>> Quantum Theory Project,
>> University of Florida
>> Ph.D. Graduate Student
>> 352-392-4032
>>
>> _______________________________________________
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>> AMBER-Developers.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber-developers
>
>
> _______________________________________________
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> AMBER-Developers.ambermd.org
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--
Dr. Andreas W. Goetz
San Diego Supercomputer Center
Tel : +1-858-822-4771
Email: agoetz.sdsc.edu
Web : www.awgoetz.de
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Received on Wed Mar 03 2010 - 14:00:04 PST
