[AMBER-Developers] Odd missing functions when making tools_serial

From: Ben Roberts <roberts.qtp.ufl.edu>
Date: Tue, 10 Nov 2009 17:42:41 -0500

Specifically, when doing the following command:

make -f Makefile_at serial

I get this response:

icc -o rdparm main.o rdparm.o dispatch.o help.o utility.o second.o
io.o trajectory.o evec.o torsion.o mask.o rms.o display.o interface.o
energy.o experimental.o ptraj.o actions.o analyze.o thermo.o pubfft.o
cluster.o clusterLib.o /Applications/Amber11/intel-mkl/lib/libpdb.a
-lpthread -lsvml ../netcdf/lib/libnetcdf.a -lm
Undefined symbols:
   "_MPI_Error_string", referenced from:
       _printMPIerr in actions.o
   "_MPI_Error_class", referenced from:
       _printMPIerr in actions.o
ld: symbol(s) not found
make[1]: *** [rdparm] Error 1
make: *** [serial] Error 2

At risk of asking a dumb question - isn't a serial build supposed to not
need anything MPI related? So how did that sneak in there? It wasn't
happening before late this afternoon (Tuesday).


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Received on Tue Nov 10 2009 - 15:00:02 PST
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