Re: [AMBER-Developers] Is anyone seeing bad behavior in trying to download Miniconda?

From: Scott Brozell via AMBER-Developers <amber-developers.ambermd.org>
Date: Mon, 20 Feb 2023 14:03:13 -0500

Hi,

I have been building routinely and have not noticed any slow downs.
The configure step takes 3 minutes and change on the clusters i use
mostly. On our newest cluster it is occasionally about 2 minutes.
I don't recall a cmake error termination in 2023.

Although I never use run_cmake unless i am beta testing, i am always
using -DDOWNLOAD_MINICONDA=TRUE:

Starting configure_cmake.py on Sat Feb 18 21:40:09 2023 via:
    ./configure_cmake.py -bw -v --mpi --cuda

...
Running cmake command:
cmake /tmp/amber -DCMAKE_INSTALL_PREFIX=/tmp/amber22 -DCOMPILER=GNU -DMPI=TRUE -DCUDA=TRUE -DOPENMP=FALSE -DBUILD_GUI=TRUE -DINSTALL_TESTS=TRUE -DBUILD_PYTHON=TRUE -DDOWNLOAD_MINICONDA=TRUE -DCHECK_UPDATES=TRUE -DAPPLY_UPDATES=FALSE -DCMAKE_BUILD_TYPE=Release -DCOLOR_CMAKE_MESSAGES=FALSE -DCMAKE_VERBOSE_MAKEFILE=TRUE


Red Hat Enterprise Linux Server release 7.9 (Maipo)
/usr/bin/python
Python 2.7.5

Red Hat Enterprise Linux release 8.4 (Ootpa)
/usr/bin/python
Python 3.6.8

scott

On Mon, Feb 20, 2023 at 10:18:07AM -0500, Daniel Roe via AMBER-Developers wrote:
> Cmake eventually succeeded. I didnt try the build yet though.
>
> On Mon, Feb 20, 2023 at 10:00 AM David A Case via AMBER-Developers <
> amber-developers.ambermd.org> wrote:
>
> > On Mon, Feb 20, 2023, Dan Roe wrote:
> > >
> > >Just to check, I ran cmake (similar invocation except for the install
> > >dirs) for Amber (GIT master) on LoBoS (Centos 7.9).
> > >
> > >[droe.tesla2 ~]$ which python
> > >/usr/bin/python
> > >[droe.tesla2 ~]$ python --version
> > >Python 2.7.5
> > >
> > >This time it took much longer (5m53.667s), hanging on the
> > >miniconda/python setup steps.
> >
> > Thanks for the info. Did things eventually succeed, or in the end (after 6
> > minutes), get a cmake error?

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Received on Mon Feb 20 2023 - 11:30:02 PST
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