Hi,
IMHO, for most of the OS's down there, the best is to download the
latest cmake release from cmake.org/download. Many OS's don't have a
correct version in their repo and if you install it with pip or conda,
you can end up with some library conflicts (see issue #119).
I'll provide a new version of Installation.php for the web site asap.
Best,
Gerald.
On 4/21/20 20:22, Daniel Roe wrote:
> I'm late to the party here but trying to test now.
>
> One thing that might be useful off the bat though is to add a note in
> the manual telling users to make sure their CMAKE version is up to
> date. There's a specific recommendation on the quick install webpage
> (https://ambermd.org/pmwiki/index.php/Main/CMake-Quick-Start) but
> nothing in the manual. We wouldn't have to put a specific version in
> the manual, but a note like "Please make sure you have at least the
> minimum version of cmake recommended here <insert URL>" etc.
>
> I'll work on tests in the meantime.
>
> -Dan
>
> On Fri, Apr 17, 2020 at 4:33 PM David A Case <david.case.rutgers.edu> wrote:
>>
>> Hi everyone:
>>
>> The third release candidate tarballs can be found here:
>>
>> ambermd.org/downloads/AmberTools20.RC3.tar.bz2
>> ambermd.org/downloads/Amber20.RC3.tar.bz2
>>
>> Note that the build instructions are different from earlier versions of
>> Amber, and even differ slightly from last week's RC2. Please read chapter
>> 2 in the doc/Amber20.pdf file, and follow the instructions there. Most
>> users will no longer need to edit the "run_cmake" script, at least to
>> get a standard serial install.
>>
>> Other changes from RC2 include new Gamd code, manual updates on protein force
>> field, a new section on GTI in pmemd.cuda, and fixes to some problems
>> that have been encountered.
>>
>> You can report errors here (editing password is 'pakrules'):
>>
>> ambermd.org/pmwiki/pmwiki.php/Main/Amber20Test
>>
>> Try to be less verbose than in previous years. In particular, there is
>> little point in repeatedly posting similar problems (and there are
>> likely to be some....)
>>
>> How to run the tests: Go to your installation directory, which defaults
>> to an amber20 folder parallel to the amber20_src folder that you un-tarred
>> the files into. Be sure to "source amber.sh", and run the following (as
>> appropriate):
>>
>> make test.serial
>> make test.parallel
>> make test.cuda_serial
>> make test.cuda_parallel
>>
>> Also: please review the doc/Amber20.pdf file, and look for things that can
>> be improved. Pay careful attention to the instructions about using cmake:
>> try to make sure that they are correct, complete, and make sense to those
>> who have never used cmake before.
>>
>> ...thx...dac
>>
>> _______________________________________________
>> AMBER-Developers mailing list
>> AMBER-Developers.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber-developers
> _______________________________________________
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> AMBER-Developers.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber-developers
--
____________________________________________________________________________
Prof. Gerald MONARD
Directeur du mésocentre EXPLOR
Université de Lorraine
Boulevard des Aiguillettes B.P. 70239
F-54506 Vandoeuvre-les-Nancy, FRANCE
e-mail : Gerald.Monard.univ-lorraine.fr
phone : +33 (0)372.745.279
mobile : +33 (0)678.006.443
web : http://www.monard.info
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Received on Tue Apr 21 2020 - 14:30:01 PDT
