To follow up, "are parallel tests breaking?"
Well some are and some aren't and there doesn't seem to be a lot of
pattern. Some TI stuff is affected, also.
lambdaphmd : test directory is missing
gamd ,
Protein-Ligand complex test,
Solvation free energy
Restrained complex
softcore electrostatics
ti_ggcc
rem_wat
etc
.
.
.
overall, for me (gnu + openmpi):
211 file comparisons passed
18 file comparisons failed
16 tests experienced an error
overall then a lot of different parts of the code have test fails.
Possibly many people have answered the call to slim down test directories
and then not properly tidied up, or have been a bit overzealous.
Josh
On 5 March 2018 at 17:12, Josh Berryman <the.real.josh.berryman.gmail.com>
wrote:
> The command "who killed my file" is:
>
> git log --diff-filter=D --summary .
>
> Running this in eg amber16/test/sodium this gives a culprit for the
> missing mdin file, however that was only one person's small commit, looking
> at the logs that person (name occluded to protect the guilty) doesn't seem
> to have been on a wholesale spree in the test directories.
>
>
> Josh
>
>
>
>
>
>
>
> On 5 March 2018 at 15:08, David A Case <david.case.rutgers.edu> wrote:
>
>> Hi everyone:
>>
>> I'm getting tons of parallel test errors, and am looking for help in
>> tracking them down.
>>
>> First: are the parallel tests (mostly) passing for everyone else?
>>
>> As an example: in amber16/test/sodium, there is no "mdin" file in the
>> master branch of the git repo. It seems to be completely necessary to
>> run that test, and is present in the amber17-with-patches branch.
>>
>> There are quite a number of similar errors, at least for me. I suspect,
>> vaguely, some overzealous cleanup of the test directories. Does this
>> ring a bell for anyone?
>>
>> Second: can anyone help to track this down (assuming that you get the
>> same error)? I'm overwhelmed with other responsibilities right now,
>> and things like this are really inhibiting getting things in shape to
>> make a release candidate.
>>
>> ...thx...dac
>>
>> p.s.: apologies if I've screwed up my installation somehow. If the
>> sodium test works for you, let me know.
>>
>> _______________________________________________
>> AMBER-Developers mailing list
>> AMBER-Developers.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber-developers
>>
>
>
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Received on Mon Mar 05 2018 - 09:00:02 PST
