Re: [AMBER-Developers] git submodule problem

From: Hai Nguyen <nhai.qn.gmail.com>
Date: Fri, 6 Oct 2017 12:54:47 -0400

On Fri, Oct 6, 2017 at 12:43 PM, Yinglong Miao <yinglong.miao.gmail.com>
wrote:

> Hello,
>
> I know this has been discussed earlier:
> http://dev-archive.ambermd.org/201706/0031.html
>
> But as I updated my git to the latest version 2.14.2, the same problem
> re-appeared:
>
> miao01:~/amber-current$ git --version
> git version 2.14.2
> miao01:~/amber-current$ git submodule update --init
> Submodule 'AmberTools/src/ambertools-binary-build'
> (git.github.com:/Amber-MD/ambertools-binary-build)
> registered for path 'AmberTools/src/ambertools-binary-build'
> ...
> Cloning into
> '/home/y147m353/amber-current/AmberTools/src/ambertools-binary-build'...
> Permission denied (publickey).
> fatal: Could not read from remote repository.
>
> Please make sure you have the correct access rights
> and the repository exists.
> fatal: clone of 'git.github.com:/Amber-MD/ambertools-binary-build' into
> submodule path
> '/home/y147m353/amber-current/AmberTools/src/ambertools-binary-build'
> failed
> Failed to clone 'AmberTools/src/ambertools-binary-build'. Retry scheduled
> Cloning into
> '/home/y147m353/amber-current/AmberTools/src/build-bot/
> docker-amber-build-box'...
> Permission denied (publickey).
> fatal: Could not read from remote repository.
> ...
>

I can not try now, but try to open .git/config (or something similiar), or
.gitmodule(s), change
"git.github.com:/Amber-MD/ambertools-binary-build"

to
"https://github.com/Amber-MD/ambertools-binary-build

Hai


>
> I was wondering what git version do we have for the remote repository. Do
> we need to install the same version locally, or which versions are
> compatible?
>
> Thanks,
> Yinglong
> _______________________________________________
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> AMBER-Developers.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber-developers
>
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Received on Fri Oct 06 2017 - 10:00:03 PDT
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