Re: [AMBER-Developers] bz2 configure error report

From: Hai Nguyen <nhai.qn.gmail.com>
Date: Thu, 23 Mar 2017 22:18:26 +0000

I am confused. What do you mean about

"was not properly handled"

Hai

On Thu, Mar 23, 2017 at 6:05 PM Ruxi Qi <ruxiq.uci.edu> wrote:

> Yes, it's only shown on configure check. I don't know which part is
> using it.
>
> Ruxi
>
>
> On 3/23/17 14:44, Hai Nguyen wrote:
> > I am confusing. That mean missing bz2 won't affect your installation and
> I
> > think it's intended.
> >
> > I am not sure about strong usage of this libbz2 if we already recommend
> > people to
> > use netcdf format.
> >
> > Hai
> >
> > On Thu, Mar 23, 2017 at 5:38 PM, Ruxi Qi <ruxiq.uci.edu> wrote:
> >
> >> No, it doesn't affect the following build. Just too explicit errors.
> >>
> >> Ruxi
> >>
> >>
> >> On 3/23/17 13:05, Hai Nguyen wrote:
> >>> Does the cònigure exit? The log says
> >>>
> >>> libbz2 Not found; this feature will be disabled.
> >>>
> >>> Hai
> >>>
> >>> On Thu, Mar 23, 2017 at 3:59 PM Ruxi Qi <ruxiq.uci.edu> wrote:
> >>>
> >>>> Hi All,
> >>>>
> >>>> FYI, seems the bz2 checking error was not properly handled if there is
> >>>> no bz2 lib. We happened to notice this on our server without bz2
> >> installed.
> >>>> Checking for libbz2:
> >>>> gcc -fPIC -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
> -DBINTRAJ
> >>>> -DHASGZ -lbz2 -o testp testp.c
> >>>> testp.c:2:19: error: bzlib.h: No such file or directory
> >>>> testp.c: In function 'main':
> >>>> testp.c:4: error: 'BZFILE' undeclared (first use in this function)
> >>>> testp.c:4: error: (Each undeclared identifier is reported only once
> >>>> testp.c:4: error: for each function it appears in.)
> >>>> testp.c:4: error: 'infile' undeclared (first use in this function)
> >>>> libbz2 Not found; this feature will be disabled.
> >>>>
> >>>> Best,
> >>>>
> >>>> Ruxi
> >>>>
> >>>>
> >>>> _______________________________________________
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> >>>> AMBER-Developers.ambermd.org
> >>>> http://lists.ambermd.org/mailman/listinfo/amber-developers
> >>>>
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Received on Thu Mar 23 2017 - 15:30:02 PDT
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