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-- Ray Luo, Ph.D. Professor of Structural Biology/Biochemistry/Biophysics, Chemical Physics, Biomedical Engineering, and Chemical Engineering Department of Molecular Biology and Biochemistry University of California, Irvine, CA 92697-3900 On Fri, Mar 10, 2017 at 5:39 AM, Jason Swails <jason.swails.gmail.com> wrote: > On Fri, Mar 10, 2017 at 8:12 AM, Daniel Roe <daniel.r.roe.gmail.com> wrote: > >> As of commit 372e01050807ea56cfe36e8164a4f8b4d59b9d1b, still broken. Same >> error. >> >> ``` >> /usr/local/cuda-7.5/bin/nvcc -gencode arch=compute_20,code=sm_20 >> -gencode arch=compute_30,code=sm_30 -gencode >> arch=compute_50,code=sm_50 -gencode arch=compute_52,code=sm_52 >> -gencode arch=compute_53,code=sm_53 -use_fast_math -O3 -ccbin g++ >> -I../cusplibrary-0.5.1 -o cuda_cg_wrapper.o -c cuda_cg_wrapper.cu >> -DCUSP -DPCG -DJacobi -DDIA >> In file included from cuda_cg_wrapper.cu:832:0: >> ../cusplibrary-0.5.1/cusp/csr_matrix.h:23:32: fatal error: >> cusp/detail/config.h: No such file or directory >> #include <cusp/detail/config.h> >> ``` > > >> File is indeed missing: >> >> ``` >> $ cd $AMBERHOME/AmberTools/src/pbsa >> $ ls ../cusplibrary-0.5.1/cusp/detail/config.h >> ls: cannot access ../cusplibrary-0.5.1/cusp/detail/config.h: No such >> file or directory >> ``` > > >> There is no config.h anywhere in the cusp directory. Have you tested >> by pulling a fresh copy into a new directory and then attempting to >> configure/install? Am I the only one seeing this? >> > > config.h is in .gitignore (since we don't want to track *our* config.h). > This is preventing Ray from adding it and "git status" from finding it. > > I've fixed this so it should ignore *only* the config.h files that our > configure script generates.. > > .Ray, try adding it again. And after you do, please try a fresh clone and > build (which would have caught this missing file) and make sure that works > first. > > All the best, > Jason > > -- > Jason M. Swails > _______________________________________________ > AMBER-Developers mailing list > AMBER-Developers.ambermd.org > http://lists.ambermd.org/mailman/listinfo/amber-developers _______________________________________________ AMBER-Developers mailing list AMBER-Developers.ambermd.org http://lists.ambermd.org/mailman/listinfo/amber-developersReceived on Fri Mar 10 2017 - 10:00:03 PST