Re: [AMBER-Developers] Issues building git master on SDSC comet

From: Ross Walker <ross.rosswalker.co.uk>
Date: Tue, 22 Mar 2016 19:29:38 -0700

MKL_HOME makes no difference either way - same problem.

--skip-python avoids the issue.


> On Mar 22, 2016, at 18:30, David A Case <david.case.rutgers.edu> wrote:
>
> On Tue, Mar 22, 2016, Ross Walker wrote:
>
>> [rcw.comet-ln3 amber]$ cat /etc/redhat-release
>> CentOS release 6.7 (Final)
>>
>> ./configure intel
>> (I said yes to download the miniconda stuff)
>> make
>>
>> (cd parmed && /home/rcw/amber/bin/amber.python setup.py install --no-setuptools -f --prefix=/home/rcw/amber --install-scripts=/home/rcw/amber/bin)
>> OpenBLAS: pthread_creat error in blas_thread_init function. Error code:11
>
> Just curious: does the --skip-python flag at least allow one to get around
> this problem?
>
> Second question: Does it make a difference if you load the MKL module?
> (MKL provides its own version of BLAS, and it may be most people (like me)
> that test intel builds also use MKL.)
>
> ...dac
>
>
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Received on Tue Mar 22 2016 - 19:30:03 PDT
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