On Tue, Mar 24, 2015 at 01:57:50PM -0400, Jason Swails wrote:
> On Tue, Mar 24, 2015 at 1:20 PM, Scott Brozell <sbrozell.rci.rutgers.edu>
> >
> > I'm in the middle of other things, so i just report this build failure:
> > up to date git master, fresh ./configure -debug pgi, but no distclean
> >
>
> ???Does pytraj work without the -debug flag?
> ???
This is due to a recent commit; it built fine before _shared_methods was added,
in particular on these dates:
Thu Mar 12 02:44:40 EDT 2015
# Amber configuration file, created with: ./configure pgi
Thu Mar 12 15:00:25 EDT 2015
# Amber configuration file, created with: ./configure -debug pgi
Note that gcc is being used instead of pgcc.
scott
> > ...
> > make pytraj
> > ...
> > building 'pytraj._shared_methods' extension
> > gcc -pthread -fno-strict-aliasing -O2 -g -pipe -Wall
> > -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector
> > --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv
> > -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
> > -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic
> > -D_GNU_SOURCE -fPIC -fwrapv -fPIC
> > -I/nfs/10/amber/AmberTools/src/cpptraj//src/
> > -I/nfs/10/amber/AmberTools/src/pytraj/pytraj/ -I/usr/include/python2.6 -c
> > /nfs/10/amber/AmberTools/src/pytraj/pytraj/_shared_methods.cpp -o
> > build/temp.linux-x86_64-2.6/nfs/10/amber/AmberTools/src/pytraj/pytraj/_shared_methods.o
> > -O0 -ggdb
> > gcc: /nfs/10/amber/AmberTools/src/pytraj/pytraj/_shared_methods.cpp: No
> > such file or directory
> > gcc: no input files
> > error: command 'gcc' failed with exit status 1
> > make[2]: *** [pytraj] Error 1
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Received on Tue Mar 24 2015 - 11:30:02 PDT
