I notice the document file: Amber12.pdf, is not updated for the most recent changes.
I am testing installation on cygwin and see the following error messages:
.......
gcc -DCYGWIN -DBINTRAJ -o utilMakeHelp.exe basics.o sysdepend.o stringExtra.o varArray.o getline.o avl.o pdb_format.o pdb_read.o pdb_sprntf.o pdb_sscanf.o pdb_write.o vector.o zMatrix.o sort.o bag.o hash.o dictionary.o database.o nVector.o ring.o matrix.o fortran.o displayer.o utilMakeHelp.o
./utilMakeHelp helptext.text helptext.c
./utilMakeHelp: ./utilMakeHelp: cannot execute binary file
Makefile:221: recipe for target `helptext.c' failed
make[3]: *** [helptext.c] Error 126
make[3]: Leaving directory `/cygdrive/c/Users/Xiongwu/programs/home/Xiongwu/ambers/amber12/AmberTools/src/leap/src/leap'
Makefile:4: recipe for target `install' failed
make[2]: *** [install] Error 2
make[2]: Leaving directory `/cygdrive/c/Users/Xiongwu/programs/home/Xiongwu/ambers/amber12/AmberTools/src/leap'
Makefile:14: recipe for target `serial' failed
make[1]: *** [serial] Error 2
make[1]: Leaving directory `/cygdrive/c/Users/Xiongwu/programs/home/Xiongwu/ambers/amber12/AmberTools/src'
Makefile:7: recipe for target `install' failed
make: *** [install] Error 2
Thanks!
Xiongwu
________________________________________
From: David A Case [case.biomaps.rutgers.edu]
Sent: Thursday, March 29, 2012 11:28 PM
To: amber-developers.ambermd.org
Subject: [AMBER-Developers] Third (final?) release candidate for Amber 12
I have placed updated tarballs here:
http://ambermd.org/downloads/AmberTools12.29mar12.tar.bz2
http://ambermd.org/downloads/Amber12.29mar12.tar.bz2
There are only minimal changes from the second release candidate, so
please test as you have time and inclination. Runs on cygwin and on
32-bit Linux would be most helpful, as would final proofreads of the
Reference manuals.
In preparation for release (now planned for the middle of next week), I
have prepared a new branch, amber12-with-patches. Please don't make commits
to that branch without clearing it with me first. The release tarballs will
be created from this branch.
Hence, you now *may* again push updates to the master (and other) branches at
git.ambermd.org. I have re-enabled write access for those who had this
before.
...thanks!...dac
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Received on Sat Mar 31 2012 - 20:30:03 PDT
