>
> Sounds like mktpp was not configured (correctly) at the configure
> stage.
> Can you run configure again and look for errors related to mtkpp? Can
> you post your config.h file?
>
[WXW%] I attach the configure output (conf_gnu.log) and the config.h file, as well as the configure output with -nomtkpp flag (conf_gnu_nomtkpp.log) here.
> If you want to soldier on, re-run configure with the -nomtkpp flag.
>
[WXW%] "make install" with the -nomtkpp flag failed with the following (different) message:
......
gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -O3 -mtune=native -m
sse -mfpmath=sse -DBINTRAJ -DHASGZ -DHASBZ2 -o paramfit calc_r_squared.o creat
e_input.o defaults.o elements.o error_messages.o eval_amber_std.o file_io.o fitt
ing_control.o help_functions.o mem_alloc.o misc_utils.o options_summary.o parame
ter_optimiser.o param_summary.o print_program_info.o process_command_line.o proc
ess_job_control_setting.o process_prmtop.o read_prmtop.o simplex.o write_input.o
genetic_algorithm.o bounds_check.o \
-lm
misc_utils.o:misc_utils.c:(.text+0xa6b): undefined reference to `_backtrace'
misc_utils.o:misc_utils.c:(.text+0xaa0): undefined reference to `_backtrace_symb
ols_fd'
collect2: ld returned 1 exit status
make[2]: *** [paramfit] Error 1
make[2]: Leaving directory `/home/wuxw/ambers/amber12/AmberTools/src/paramfit'
make[1]: *** [serial] Error 2
make[1]: Leaving directory `/home/wuxw/ambers/amber12/AmberTools/src'
make: *** [install] Error 2
Thanks!
Xiongwu
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Received on Wed Mar 21 2012 - 13:00:03 PDT
