According to the manual, ff10 has the chi1.OL3 modifications. It should be
part of parm10.dat.
I'm in the process of checking this out now ;).
All the best,
Jason
On Sun, Mar 27, 2011 at 11:23 AM, <yildirim.pas.rochester.edu> wrote:
> I have a question regarding the amber ff10 force field. Is there any
> revision for chi torsions? If yes, which parameter set is used?
>
> Ilyas Yildirim, Ph.D.
> -----------------------------------------------------------
> = Department of Chemistry - 2145 Sheridan Road =
> = Northwestern University - Evanston, IL 60208 =
> = Ryan Hall #4035 (Nano Building) - Ph.: (847)467-4986 =
> = http://www.pas.rochester.edu/~yildirim/ =
> -----------------------------------------------------------
>
>
> On Sun, 27 Mar 2011, Jason Swails wrote:
>
> > On Sun, Mar 27, 2011 at 4:39 AM, case <case.biomaps.rutgers.edu> wrote:
> >
> >> Hi everyone:
> >>
> >> I have posted a new release candidate here:
> >>
> >> http://ambermd.org/downloads/AmberTools.26mar11.tar.bz2
> >>
> >> Still needed:
> >>
> >> 1. Proofreading of Users' Manual.
> >> 2. Testing of the ff10 force field files
> >>
> >
> > How would we check that the RNA/DNA force fields act as advertised? Are
> the
> > chi.OL3 parameters found in a separate frcmod file somewhere that we
> could
> > add onto ff99bsc0?
> >
> > 3. Minor tweaks to the tests, esp. MMPBSA.py
> >>
> >
> > What tweaks are needed here?
> >
> >
> >>
> >> I know lots of people are at ACS, but any help you can give (especially
> for
> >> item 2) would help us get this baby out the door.
> >>
> >> ...thanks...dac
> >>
> >>
> >> _______________________________________________
> >> AMBER-Developers mailing list
> >> AMBER-Developers.ambermd.org
> >> http://lists.ambermd.org/mailman/listinfo/amber-developers
> >>
> >
> >
> >
> > --
> > Jason M. Swails
> > Quantum Theory Project,
> > University of Florida
> > Ph.D. Candidate
> > 352-392-4032
> > _______________________________________________
> > AMBER-Developers mailing list
> > AMBER-Developers.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber-developers
> >
>
> _______________________________________________
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> AMBER-Developers.ambermd.org
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>
--
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Candidate
352-392-4032
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Received on Sun Mar 27 2011 - 11:30:03 PDT
