[AMBER-Developers] make serial compile error

From: B. Lachele Foley <lfoley.uga.edu>
Date: Sat, 4 Dec 2010 19:21:45 +0000

If the installation instructions have changed, just say and sorry I missed it. I'll run again. I pulled just now (4 Dec., 13:30h EST). It looks like it might be an environment settings error. Or not...

On that note, can there be a file for the developers that contains the most recent installation instructions? Even to have a file that says "no changes from last release" would be great. I always worry I missed something on the list.

I did:

  export AMBERHOME=/path/to/amber
  export PATH=$AMBERHOME/bin:$PATH
  cd AmberTools/src
  ./configure gnu
  make install
  cd ../../src
  make serial

AmberTools (serial) compiled fine, but Amber serial fails with:

gfortran -O0 -ffree-form -c -o rmsgrd.o rmsgrd.f
Warning: rmsgrd.f:2: Illegal preprocessor directive
Warning: rmsgrd.f:3: Illegal preprocessor directive
Warning: rmsgrd.f:4: Illegal preprocessor directive
Warning: rmsgrd.f:19: Illegal preprocessor directive
Warning: rmsgrd.f:20: Illegal preprocessor directive
Warning: rmsgrd.f:21: Illegal preprocessor directive

   use poisson_boltzmann, only : outwat, oution
Fatal Error: Can't open module file 'poisson_boltzmann.mod' for reading at (1): No such file or directory
make[1]: *** [rmsgrd.o] Error 1
make[1]: Leaving directory `/e14/programs/amber.git_20101203/src/sander'
make: *** [serial] Error 2

The file is present in: ./AmberTools/src/pbsa/poisson_boltzmann.mod
I suspect the complaints about the include lines are the more important error, but I don't have enough experience using fortran in a C world to diagnose.

I only two systems with a pull last night, both Intel-based. One RHEL using gcc 4.4.0 and the other Slackware using gcc 4.2.4. They did the same.

:-) Lachele

Dr. B. Lachele Foley
Complex Carbohydrate Research Center
The University of Georgia
Athens, GA USA
AMBER-Developers mailing list
Received on Sat Dec 04 2010 - 11:30:03 PST
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