Re: [AMBER-Developers] CVS Tree Locked

From: Scott Brozell <>
Date: Mon, 8 Mar 2010 17:50:34 -0500


Once upon a time the test makefile did not do this, eg:
   export TESTsander=$(AMBERHOME)/exe/sander.MPI; cd 4096wat && ./Run.column_fft

Try using the -e option as a workaround; this has worked for me on linux:
 make -e TESTsander=/amber/amber11/bin/sander.pgi-ktrap=fp test.parallel


On Fri, Mar 05, 2010 at 11:36:16PM -0500, Daniel Roe wrote:
> I will take responsibility for this. I was testing the code for Carlos, but
> I forgot that the test Makefile overwrites the TESTsander variable for the
> parallel tests. So when I ran the parallel tests I wasn't testing what I set
> TESTsander to, I was testing the default ($(AMBERHOME)/exe/sander.MPI). As a
> bonus the error doesn't show up when the fdist subroutine isnt called (i.e
> REM runs etc with 1 thread per group still passed the parallel tests). Sorry
> everyone.
> Can anyone suggest an easy way to modify the parallel tests so that you can
> set a variable to point to the binary you want to test (like TESTsander in
> the serial tests). I suppose you could have a SANDERMPI variable in the
> makefile or something that TESTsander gets set to, like
> export TESTsander=$(SANDERMPI)
> and SANDERMPI can be set to $(AMBERHOME)/exe/sander.MPI if empty?

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Received on Mon Mar 08 2010 - 15:00:02 PST
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