[AMBER-Developers] Amber Tools Install

From: Lachele Foley <lfoley.ccrc.uga.edu>
Date: Tue, 17 Mar 2009 15:28:04 +0000

Got amber 11 from CVS last night. Lots of it worked except for this:

make[3]: Entering directory `/e14/programs/amber11_20090316/src/gleap/mortsrc/pdbent'
g++ -c -O2 -Wall -W -D_REENTRANT -I. -I.. -I../../freelib -I. -I.. -I../../freelib -o atom.o atom.cpp
g++ -c -O2 -Wall -W -D_REENTRANT -I. -I.. -I../../freelib -I. -I.. -I../../freelib -o bond.o bond.cpp
bond.cpp: In function ‘void mort::pdbent::read_bond(std::istream&, mort::molecule_t&)’:
bond.cpp:18: error: no matching function for call to ‘min(long unsigned int, unsigned int)’
make[3]: *** [bond.o] Error 1
make[3]: Leaving directory `/e14/programs/amber11_20090316/src/gleap/mortsrc/pdbent'
make[2]: *** [all] Error 2
make[2]: Leaving directory `/e14/programs/amber11_20090316/src/gleap/mortsrc'
make[1]: *** [sleap] Error 2
make[1]: Leaving directory `/e14/programs/amber11_20090316/src/gleap'
make: *** [install] Error 2

Other info, in case you care:

[installer.frost src]$ echo $AMBERHOME
[installer.frost src]$ echo $PATH

[installer.frost src]$ gcc --version
gcc (GCC) 4.2.3

[installer.frost src]$ g++ --version
g++ (GCC) 4.2.3

[installer.frost src]$ gfortran --version
GNU Fortran (GCC) 4.2.3

The configuration didn't give any complaints; it said it was successful. Did I do something silly? Apologies if so...

:-) Lachele
B. Lachele Foley, PhD '92,'02
Assistant Research Scientist
Complex Carbohydrate Research Center, UGA

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Received on Wed Mar 18 2009 - 01:16:55 PDT
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