Re: amber-developers: second draft release for AmberTools1.1

From: Scott Brozell <>
Date: Fri, 27 Jun 2008 18:10:37 -0700 (PDT)


On Wed, 25 Jun 2008, David A. Case wrote:

> Hi everyone:
> We have an second candidate release tarball:
> This has all contributions up to yesterday (24 jun). Please grab a copy and
> try it out on your machine. I would appreciate it if people could post
> results to the amber-developers list -- let us know what cpu/os/compiler
> you tried, and what happened on compilation and testing. I have grants to
> write, and only a few machines around anyway, so I would really appreciate
> tests, especially on Sun, IBM, MacOS, SGI [i.e. weird systems :-) ]

I tested on a macos and an opteron.
The mac has test issues with awk that may be operator error
and some antechamber sig fig differences.
I wont get back to this until late tomw.
platform details below,

> Also, if you have a chance, please look for missing or broken items in the
> dat directory (and elsewhere). One of the glitches in version 1.0 was that
> we were missing some library files, but that didn't show up in the tests.
> So, poke around in various places, and let us know if something looks amiss.

Darwin 7.9.0 Darwin Kernel Version 7.9.0: Wed Mar 30 20:11:17 PST 2005; root:xnu/xnu-517.12.7.obj~1/RELEASE_PPC Power Macintosh powerpc
Reading specs from /usr/libexec/gcc/darwin/ppc/3.3/specs
Thread model: posix
gcc version 3.3 20030304 (Apple Computer, Inc. build 1495)

model name : Dual-Core AMD Opteron(tm) Processor 8218
Linux 2.6.18-92.el5 #1 SMP Tue Apr 29 13:16:15 EDT 2008 x86_64 x86_64 x86_64 GNU/Linux
Using built-in specs.
Target: x86_64-redhat-linux
Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-libgcj-multifile --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --enable-plugin --with-java-home=/usr/lib/jvm/java-1.4.2-gcj- --with-cpu=generic --host=x86_64-redhat-linux
Thread model: posix
gcc version 4.1.2 20071124 (Red Hat 4.1.2-42)
Received on Sun Jun 29 2008 - 06:07:54 PDT
Custom Search