Re: [AMBER-Developers] can people try an AmberTools/Amber build using the current master branch?

From: Wu, Xiongwu (NIH/NHLBI) [E] <"Wu,>
Date: Thu, 27 May 2021 02:02:33 +0000

Hi Dave,
I found I need to run make clean at the amber20_src folder before your building procedure. Previous error message was due to old *.o files.
With a clean copy of amber20 and amberTools there should be no such problem.
Thanks!
Xiongwu

-----Original Message-----
From: David A Case <david.case.rutgers.edu>
Sent: Wednesday, May 26, 2021 2:41 PM
To: AMBER Developers Mailing List <amber-developers.ambermd.org>
Subject: Re: [AMBER-Developers] can people try an AmberTools/Amber build using the current master branch?

On Fri, May 21, 2021, Xiongwu Wu wrote:

>I tried according to your procedure with cmake/3.18.0 and intel/17.0.1
>compiler. Make install stopped with the error message listed below.
>
>
>Here is the error message:

>[ 28%] Building Fortran object
>AmberTools/src/sqm/CMakeFiles/sqm_common.dir/elementOrbitalIndex.F90.o
>/u/wxw/ambers/amber20_src/AmberTools/src/sqm/elementOrbitalIndex.F90:12.6:
>
> use UtilitiesModule, only: Upcase
> 1
>Fatal Error: File 'utilitiesmodule.mod' opened at (1) is not a GNU
>Fortran module file

This seems odd, since you are using Intel compilers. I know things work on more recent (2019) Intel compilers. Maybe someone on the list has experience with Intel 17.

Can you try this: type "VERBOSE=1 make -j1 " after the cmake step. This will give more information about exactly what is going on.

...thanks...dave


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Received on Wed May 26 2021 - 19:30:02 PDT
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