[AMBER-Developers] Amber18/AmberTools18 release candidate 4

From: David A Case <david.case.rutgers.edu>
Date: Mon, 2 Apr 2018 11:17:13 -0400

Hi everyone:

You can get the third release candidate (RC3) tarballs here:

   ambermd.org/downloads/AmberTools18.31mar18.tar.bz2.rccjlm
   ambermd.org/downloads/Amber18.31mar18.tar.bz2.rccjlm

Strip off the final suffix, untar and test.

You can see test summaries here:

   ambermd.org/pmwiki/pmwiki.php/Main/Amber18Test

Go ahead and add your own (editing password is "pakrules").

Notes:

1. This candiate has only minor changes from the last one (mcwat, FEW
test case fixes), so don't feel obliged to spend time re-running what
you did for RC3. Your time would be better spent proofing the manual,
which has a lot of changes from RC3.

2. The situation with GNU compilers on CPU is pretty good, so
concentrate on:

     a. parallel tests with Intel or PGI compilers
     b. cuda tests: please list your nvcc version on type of GPU
     c. cuda tests with the -afe option to configure (I don't think
         anyone has done this yet, so there may well be problems.)

3. Right now, I am focussing on the legacy Makefile build system. But
I encourage you to test the CMake build. Do this:

      cd amber18 # where you untarred stuff
      ./configure_cmake --full-help

Then pick the options you want.

If you see cmake-specific problems, please post those comments here:

    github.com/Amber-MD/cmake-buildscripts/issues/108


...thanks!...dac


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Received on Mon Apr 02 2018 - 08:30:03 PDT
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