Re: [AMBER-Developers] cuda serial compiling error

From: Hai Nguyen <nhai.qn.gmail.com>
Date: Sun, 11 Mar 2018 18:31:28 -0400

I guess this is due to cusplibrary-cuda9

is not included in mkrelease_at yet.

Hai

On Sun, Mar 11, 2018 at 6:27 PM, Feng Pan <fpan3.ncsu.edu> wrote:

> Hello, everyone
>
> I am doing the test on the first release candidate of Amber18. However, I
> met some error when
> compiling the cuda serial version, it looks it is in the compiling of cuda
> version of PBSA
>
> /usr/local/cuda/bin/nvcc -gencode arch=compute_30,code=sm_30 -gencode
> arch=compute_50,code=sm_50 -gencode arch=compute_52,code=sm_52 -gencode
> arch=compute_53,code=sm_53 -use_fast_math -O3 -ccbin g++
> -I../cusplibrary-cuda9 -o cuda_cg_wrapper.o -c cuda_cg_wrapper.cu -DCUSP
> -DPCG -DJacobi -DDIA
> In file included from
> ../cusplibrary-cuda9/cusp/system/cuda/detail/multiply/coo_spmv_cub.h:54:0,
> from
> ../cusplibrary-cuda9/cusp/system/cuda/detail/multiply.h:22,
> from
> ../cusplibrary-cuda9/cusp/system/detail/adl/multiply.h:42,
> from ../cusplibrary-cuda9/cusp/detail/multiply.inl:19,
> from ../cusplibrary-cuda9/cusp/multiply.h:388,
> from ../cusplibrary-cuda9/cusp/krylov/detail/cg.inl:19,
> from ../cusplibrary-cuda9/cusp/krylov/cg.h:150,
> from cuda_cg_wrapper.cu:667:
> ../cusplibrary-cuda9/cusp/system/cuda/arch.h:27:44: fatal error:
> thrust/system/cuda/detail/arch.h: No such file or directory
> #include <thrust/system/cuda/detail/arch.h>
> ^
> compilation terminated.
>
> I am using CUDA 7.5, GTX Titan X, gnu 4.8.2 on centos 6.6, anyone has any
> idea on this error, should I use a higher version of CUDA?
>
> Best regards
> Feng
>
> --
> Feng Pan
> Ph.D.
> North Carolina State University
> Department of Physics
> Email: fpan3.ncsu.edu
> _______________________________________________
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>
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Received on Sun Mar 11 2018 - 16:00:02 PDT
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