cd /home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src && make install make[1]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src' Starting installation of AmberTools17 serial at Mon Apr 3 21:37:04 CEST 2017. (cd ucpp-1.3 && make install ) make[2]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/ucpp-1.3' pgcc -o ucpp mem.o nhash.o cpp.o lexer.o assert.o macro.o eval.o mv ucpp /home/amber/amber/ReleaseCandidate/build-pgi/amber16/bin make[2]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/ucpp-1.3' (cd byacc && make install ) make[2]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/byacc' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/byacc' (cd arpack && make install ); make[2]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/arpack' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/arpack' (cd lapack && make install ) make[2]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/lapack' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/lapack' (cd blas && make install ) make[2]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/blas' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/blas' (cd c9x-complex && make skip ) make[2]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/c9x-complex' using built-in (C99) complex.h functionality make[2]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/c9x-complex' (cd pbsa && make install ) make[2]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/pbsa' Always rebuild [ pb_lsolver.o [ cuda_cg_wrapper.o band2csr.o ]] to make predefined macros effective pgf90 -DBINTRAJ -DEMIL -c -fast -O3 -fastsse -fPIC -Mfree -I/home/amber/amber/ReleaseCandidate/build-pgi/amber16/include -I/home/amber/amber/ReleaseCandidate/build-pgi/amber16/include -o pb_lsolver.o pb_lsolver.F90 cd ../lib && make nxtsec.o random.o cd ../lapack && make install make[3]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/lib' make[3]: 'nxtsec.o' is up to date. make[3]: 'random.o' is up to date. make[3]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/lib' make[3]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/lapack' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/lapack' cd ../blas && make install make[3]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/blas' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/blas' cd ../arpack && make install make[3]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/arpack' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/arpack' pgf90 -DBINTRAJ -DEMIL -c -fast -O3 -fastsse -fPIC -Mfree -I/home/amber/amber/ReleaseCandidate/build-pgi/amber16/include -I/home/amber/amber/ReleaseCandidate/build-pgi/amber16/include -o pb_fddrv.o pb_fddrv.F90 pgf90 -DBINTRAJ -DEMIL -fPIC -Mfree -I/home/amber/amber/ReleaseCandidate/build-pgi/amber16/include -I/home/amber/amber/ReleaseCandidate/build-pgi/amber16/include -o pbsa dsvdc.o pbsa.o pb_read.o pb_write.o getcoor.o runmd.o runmin.o force.o pbsa_lib.o pb_init.o sa_driver.o density.o np_force.o pb_force.o pb_p3m.o pb_fdfrc.o pb_crgview.o pb_fddrv.o pb_iimdrv.o pb_nlsolver.o pb_bldsys.o pb_mpfrc.o pb_direct.o pb_list.o timer.o egb.o ene.o locmem.o myopen.o rdparm.o pb_lsolver.o decomp.o rgroup.o rfree.o debug.o coed20.o irre32.o phidev.o project.o qld.o coed6.o irre31.o miniop.o iimod.o prodis.o qint.o wint.o transf.o curv.o GrToPr.o jumps.o problem.o regular.o gmres.o daxpy.o ddot.o dheqr.o dpigmr.o dscal.o dslui2.o dxlcal.o dchkw.o dgmres.o dnrm2.o drlcal.o dsilus.o dslui.o isdgmr.o dcopy.o dhels.o dorth.o ds2y.o dslugm.o dsmv.o qs2i1d.o d1mach.o fdump.o i1mach.o j4save.o xercnt.o xerhlt.o xermsg.o xerprn.o xersve.o xgetua.o bicg.o dbcg.o dslui4.o dsluti.o dsmtv.o dslubc.o isdbcg.o pb_chkfrc.o svdcmp.o svbksb.o pythag.o pb_augdrv.o gmresX.o interpX.o matvec3.o gen_dx_file.o aug_iccg.o parms.o memory_module.o rdpqr.o \ ../lib/nxtsec.o ../lib/random.o \ -L/home/amber/amber/ReleaseCandidate/build-pgi/amber16/lib -larpack -llapack -lblas -lxblas-amb /bin/mv pbsa /home/amber/amber/ReleaseCandidate/build-pgi/amber16/bin make[2]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/pbsa' (cd gbnsr6 && make install ) make[2]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/gbnsr6' cd ../lib && make nxtsec.o random.o cd ../lapack && make install make[3]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/lib' make[3]: 'nxtsec.o' is up to date. make[3]: 'random.o' is up to date. make[3]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/lib' make[3]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/lapack' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/lapack' cd ../blas && make install make[3]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/blas' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/blas' cd ../arpack && make install make[3]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/arpack' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/arpack' pgf90 -DBINTRAJ -DEMIL -fPIC -Mfree -I/home/amber/amber/ReleaseCandidate/build-pgi/amber16/include -I/home/amber/amber/ReleaseCandidate/build-pgi/amber16/include -o gbnsr6 gbnsr6.o pb_read.o gb_read.o pb_write.o getcoor.o runmd.o runmin.o force.o pb_init.o sa_driver.o np_force.o variable_module.o pb_exmol.o NSR6routines.o pb_list.o timer.o egb.o ene.o locmem.o myopen.o rdparm.o decomp.o rgroup.o rfree.o debug.o svdcmp.o svbksb.o parms.o pythag.o memory_module.o gen_dx_file.o \ ../lib/nxtsec.o ../lib/random.o \ -L/home/amber/amber/ReleaseCandidate/build-pgi/amber16/lib -larpack -llapack -lblas -lxblas-amb /bin/mv gbnsr6 /home/amber/amber/ReleaseCandidate/build-pgi/amber16/bin make[2]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/gbnsr6' (cd cifparse && make install ) make[2]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/cifparse' /bin/rm -f libcifparse.a ar rv libcifparse.a lex.cif.o cifp.tab.o cifparse.o ar: creating libcifparse.a a - lex.cif.o a - cifp.tab.o a - cifparse.o ranlib libcifparse.a mv libcifparse.a /home/amber/amber/ReleaseCandidate/build-pgi/amber16/lib make[2]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/cifparse' (cd antechamber && make install ) make[2]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/antechamber' pgcc -fPIC -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -DHASGZ -DHASBZ2 -D__PLUMED_HAS_DLOPEN acdoctor.o eprintf.o \ -L/home/amber/amber/ReleaseCandidate/build-pgi/amber16/lib -lcifparse -lm -o acdoctor pgcc -fPIC -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -DHASGZ -DHASBZ2 -D__PLUMED_HAS_DLOPEN antechamber.o eprintf.o \ -L/home/amber/amber/ReleaseCandidate/build-pgi/amber16/lib -lcifparse -lm -o antechamber SFX= BINDIR=/home/amber/amber/ReleaseCandidate/build-pgi/amber16/bin sh patch.sh cp acdoctor /home/amber/amber/ReleaseCandidate/build-pgi/amber16/bin/to_be_dispatched/acdoctor cp antechamber /home/amber/amber/ReleaseCandidate/build-pgi/amber16/bin/to_be_dispatched/antechamber make[2]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/antechamber' (cd sqm && make install ) make[2]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/sqm' cd ../lapack; make install cd ../lib; make sys.a make[3]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/lib' make[3]: 'sys.a' is up to date. make[3]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/lib' make[3]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/lapack' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/lapack' cd ../blas; make install make[3]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/blas' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/blas' cd ../arpack && make install make[3]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/arpack' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/arpack' pgf90 -DBINTRAJ -DEMIL -fPIC -Mfree -I/home/amber/amber/ReleaseCandidate/build-pgi/amber16/include -I/home/amber/amber/ReleaseCandidate/build-pgi/amber16/include -o sqm file_io_dat.o constants.o findmask.o sqm.SQM.o xmin.o xminC.o amopen.o mexit.o assert.o timer_dummy.o nmlsrc.o qm_print_info.SQM.o qm2_energy.SQM.o qm2_read_nm_and_alloc.SQM.o qm2_scf.SQM.o qm2_dftb_scf.SQM.o qm2_allocate_e_repul.o qm2_calc_charges.o qm2_calc_dipole.o qm2_calc_rij_and_eqns.o qm2_dihed.o qm2_fock.o qm2_get_qm_forces.o qm2_get_qmmm_forces.o qm2_h1elec.o qm2_hcore_qmqm.o qm2_hcore_qmmm.o qm2_identify_peptide_links.o qm2_load_params_and_allocate.o qm2_repp.o qm2_rotate_qmqm.o qm2_core_core_repulsion.o qm2_core_core_repulsion_dxyz.o qm2_iterator_mod.o qm2_diagonalizer_module.o qm2_setup_orb_exp.o qm2_smallest_number.o qm2_fock_predict.o qm_gb.o qm_zero_charges.o qm_assign_atom_types.o qm_link_atoms.o qm2_print_charges.o qmmm_qmtheorymodule.o qm2_print_bondorders.o qm2_pm6_hof_module.o qm2_params_module.o qm2_dftb_module.o qm2_dftb_broyden.o qm2_dftb_dispersion_egr.o qm2_dftb_dispersion_params.o qm2_dftb_dispersionread.o qm2_dftb_energy.o qm2_dftb_ewevge.o qm2_dftb_externalshift.o qm2_dftb_fermi.o qm2_dftb_get_qm_forces.o qm2_dftb_gamma.o qm2_dftb_gammamat.o qm2_dftb_get_qmmm_forces.o qm2_dftb_gettab.o qm2_dftb_load_params.o qm2_dftb_mulliken.o qm2_dftb_repulsiv.o qm2_dftb_self.o qm2_dftb_shift.o qm2_dftb_skpar.o qm2_dftb_slkode.o qm2_dftb_slktrafo.o qm2_dftb_read_cm3.o qm2_dftb_cm3.o qm2_dftb_gb.o qm2_dftb_3rd_order.o qmmm_module.o qmmm_nml_module.o qmmm_struct_module.o qmmm_vsolv_module.o qm2_parameters.o dh_correction_module.o utilitiesModule.o elementOrbitalIndex.o parameterReader.o slater_overlap.o qm2_h1elec_d.o rotation.o qm2_repp_d.o opnq_Edisp.o opnq_Erep.o opnq_Evdw.o opnq.o opnq_SwitchMod.o qm2_fock_d.o MNDOChargeSeparation.o qm2_print_energy.o qm2_dftb_get_dftb3_parameters.o qm2_dftb_gamma_dftb3.o \ -L/home/amber/amber/ReleaseCandidate/build-pgi/amber16/lib -larpack -llapack -lblas -lxblas-amb ../lib/sys.a mv sqm /home/amber/amber/ReleaseCandidate/build-pgi/amber16/bin make[2]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/sqm' (cd reduce && make install ) make[2]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/reduce' installing ./toolclasses... make[3]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/reduce/toolclasses' pgc++ -O -DCHARFUNCMACROS -DINCTEMPLATEDEFNS -DBOOLPREDEFINED -DBRACKETOPERPARMS -DLISTFRIENDFIX -c Point3d.cpp -o Point3d.o pgc++ -O -DCHARFUNCMACROS -DINCTEMPLATEDEFNS -DBOOLPREDEFINED -DBRACKETOPERPARMS -DLISTFRIENDFIX -c Stringclass.cpp -o Stringclass.o pgc++ -O -DCHARFUNCMACROS -DINCTEMPLATEDEFNS -DBOOLPREDEFINED -DBRACKETOPERPARMS -DLISTFRIENDFIX -c utility.cpp -o utility.o "/usr/include/c++/6.3.1/exception", line 64: error: expected a ";" virtual ~exception() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 69: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 81: error: expected a ";" virtual ~bad_exception() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 85: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 64: error: expected a ";" virtual ~exception() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 69: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 81: error: expected a ";" virtual ~bad_exception() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 85: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 64: error: expected a ";" virtual ~exception() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 69: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 81: error: expected a ";" virtual ~bad_exception() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 85: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 381: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(is_nothrow_default_constructible<_Alloc>::value) ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 5289: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(noexcept(__lhs.swap(__rhs))) ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 5312: error: "operator>>" is not a class or function template name in the current scope operator>>(basic_istream& __is, basic_string& __str); ^ "/usr/include/c++/6.3.1/bits/basic_string.tcc", line 348: error: declaration is incompatible with "void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::resize(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type)" (declared at line 827 of "/usr/include/c++/6.3.1/bits/basic_string.h") resize(size_type __n, _CharT __c) ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 381: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(is_nothrow_default_constructible<_Alloc>::value) ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 5289: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(noexcept(__lhs.swap(__rhs))) ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 5312: error: "operator>>" is not a class or function template name in the current scope operator>>(basic_istream& __is, basic_string& __str); ^ "/usr/include/c++/6.3.1/bits/basic_string.tcc", line 348: error: declaration is incompatible with "void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::resize(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type)" (declared at line 827 of "/usr/include/c++/6.3.1/bits/basic_string.h") resize(size_type __n, _CharT __c) ^ "/usr/include/c++/6.3.1/stdexcept", line 120: error: expected a ";" logic_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 132: error: expected a ";" virtual ~logic_error() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 137: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 150: error: expected a ";" explicit domain_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 161: error: expected a ";" explicit invalid_argument(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 173: error: expected a ";" explicit length_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 185: error: expected a ";" explicit out_of_range(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 204: error: expected a ";" runtime_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 216: error: expected a ";" virtual ~runtime_error() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 221: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 233: error: expected a ";" explicit range_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 244: error: expected a ";" explicit overflow_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 255: error: expected a ";" explicit underflow_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 381: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(is_nothrow_default_constructible<_Alloc>::value) ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 5289: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(noexcept(__lhs.swap(__rhs))) ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 5312: error: "operator>>" is not a class or function template name in the current scope operator>>(basic_istream& __is, basic_string& __str); ^ "/usr/include/c++/6.3.1/bits/basic_string.tcc", line 348: error: declaration is incompatible with "void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::resize(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type)" (declared at line 827 of "/usr/include/c++/6.3.1/bits/basic_string.h") resize(size_type __n, _CharT __c) ^ "utility.cpp", line 211: error: no instance of constructor "std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::basic_string [with _CharT=char, _Traits=std::char_traits, _Alloc=std::allocator]" matches the argument list argument types are: (char *) std::string retval( buf ); ^ 9 errors detected in the compilation of "utility.cpp". Makefile:13: recipe for target 'utility.o' failed make[3]: *** [utility.o] Error 2 make[3]: *** Waiting for unfinished jobs.... "/usr/include/c++/6.3.1/stdexcept", line 120: error: expected a ";" logic_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 132: error: expected a ";" virtual ~logic_error() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 137: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 150: error: expected a ";" explicit domain_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 161: error: expected a ";" explicit invalid_argument(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 173: error: expected a ";" explicit length_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 185: error: expected a ";" explicit out_of_range(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 204: error: expected a ";" runtime_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 216: error: expected a ";" virtual ~runtime_error() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 221: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 233: error: expected a ";" explicit range_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 244: error: expected a ";" explicit overflow_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 255: error: expected a ";" explicit underflow_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 162: error: the global scope has no "acos" using ::acos; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 181: error: the global scope has no "asin" using ::asin; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 240: error: the global scope has no "ceil" using ::ceil; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 278: error: the global scope has no "cosh" using ::cosh; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 335: error: the global scope has no "floor" using ::floor; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 354: error: the global scope has no "fmod" using ::fmod; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 375: error: the global scope has no "frexp" using ::frexp; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 394: error: the global scope has no "ldexp" using ::ldexp; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 451: error: the global scope has no "modf" using ::modf; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 519: error: the global scope has no "sinh" using ::sinh; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 576: error: the global scope has no "tanh" using ::tanh; ^ "Point3d.cpp", line 216: error: more than one instance of overloaded function "acos" matches the argument list: function "std::acos(long double)" function "std::acos(float)" argument types are: (double) if (amag*bmag >= 0.0001) { theta = acos(dot(a, b)/(amag*bmag)); } ^ "Point3d.cpp", line 234: error: more than one instance of overloaded function "acos" matches the argument list: function "std::acos(long double)" function "std::acos(float)" argument types are: (double) if (dmag*emag >= 0.0001) { theta = acos(dot(d, e)/(dmag*emag)); } ^ "Point3d.cpp", line 241: error: more than one instance of overloaded function "acos" matches the argument list: function "std::acos(long double)" function "std::acos(float)" argument types are: (double) if (fmag*emag >= 0.0001) { phi = acos(dot(f, e)/(fmag*emag)); } ^ 35 errors detected in the compilation of "Point3d.cpp". Makefile:13: recipe for target 'Point3d.o' failed make[3]: *** [Point3d.o] Error 2 21 errors detected in the compilation of "Stringclass.cpp". Makefile:13: recipe for target 'Stringclass.o' failed make[3]: *** [Stringclass.o] Error 2 make[3]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/reduce/toolclasses' installing ./libpdb... make[3]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/reduce/libpdb' pgc++ -O -DBOOLPREDEFINED -DHASSSCANFEXTERN -c pdb_read.cpp -o pdb_read.o pgc++ -O -DBOOLPREDEFINED -DHASSSCANFEXTERN -c pdb_sprntf.cpp -o pdb_sprntf.o pgc++ -O -DBOOLPREDEFINED -DHASSSCANFEXTERN -c pdb_sscanf.cpp -o pdb_sscanf.o "/usr/include/c++/6.3.1/exception", line 64: error: expected a ";" virtual ~exception() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 69: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 81: error: expected a ";" virtual ~bad_exception() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 85: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 64: error: expected a ";" virtual ~exception() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 69: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 81: error: expected a ";" virtual ~bad_exception() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 85: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 64: error: expected a ";" virtual ~exception() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 69: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 81: error: expected a ";" virtual ~bad_exception() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 85: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 381: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(is_nothrow_default_constructible<_Alloc>::value) ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 5289: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(noexcept(__lhs.swap(__rhs))) ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 5312: error: "operator>>" is not a class or function template name in the current scope operator>>(basic_istream& __is, basic_string& __str); ^ "/usr/include/c++/6.3.1/bits/basic_string.tcc", line 348: error: declaration is incompatible with "void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::resize(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type)" (declared at line 827 of "/usr/include/c++/6.3.1/bits/basic_string.h") resize(size_type __n, _CharT __c) ^ "/usr/include/c++/6.3.1/stdexcept", line 120: error: expected a ";" logic_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 132: error: expected a ";" virtual ~logic_error() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 137: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 150: error: expected a ";" explicit domain_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 161: error: expected a ";" explicit invalid_argument(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 173: error: expected a ";" explicit length_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 185: error: expected a ";" explicit out_of_range(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 204: error: expected a ";" runtime_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 216: error: expected a ";" virtual ~runtime_error() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 221: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 233: error: expected a ";" explicit range_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 244: error: expected a ";" explicit overflow_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 255: error: expected a ";" explicit underflow_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 381: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(is_nothrow_default_constructible<_Alloc>::value) ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 5289: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(noexcept(__lhs.swap(__rhs))) ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 5312: error: "operator>>" is not a class or function template name in the current scope operator>>(basic_istream& __is, basic_string& __str); ^ "/usr/include/c++/6.3.1/bits/basic_string.tcc", line 348: error: declaration is incompatible with "void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::resize(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type)" (declared at line 827 of "/usr/include/c++/6.3.1/bits/basic_string.h") resize(size_type __n, _CharT __c) ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 381: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(is_nothrow_default_constructible<_Alloc>::value) ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 5289: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(noexcept(__lhs.swap(__rhs))) ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 5312: error: "operator>>" is not a class or function template name in the current scope operator>>(basic_istream& __is, basic_string& __str); ^ "/usr/include/c++/6.3.1/bits/basic_string.tcc", line 348: error: declaration is incompatible with "void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::resize(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type)" (declared at line 827 of "/usr/include/c++/6.3.1/bits/basic_string.h") resize(size_type __n, _CharT __c) ^ "/usr/include/c++/6.3.1/stdexcept", line 120: error: expected a ";" logic_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 132: error: expected a ";" virtual ~logic_error() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 137: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 150: error: expected a ";" explicit domain_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 161: error: expected a ";" explicit invalid_argument(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 173: error: expected a ";" explicit length_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 185: error: expected a ";" explicit out_of_range(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 204: error: expected a ";" runtime_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 216: error: expected a ";" virtual ~runtime_error() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 221: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 233: error: expected a ";" explicit range_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 244: error: expected a ";" explicit overflow_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 255: error: expected a ";" explicit underflow_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 120: error: expected a ";" logic_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 132: error: expected a ";" virtual ~logic_error() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 137: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 150: error: expected a ";" explicit domain_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 161: error: expected a ";" explicit invalid_argument(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 173: error: expected a ";" explicit length_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 185: error: expected a ";" explicit out_of_range(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 204: error: expected a ";" runtime_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 216: error: expected a ";" virtual ~runtime_error() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 221: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 233: error: expected a ";" explicit range_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 244: error: expected a ";" explicit overflow_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 255: error: expected a ";" explicit underflow_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ 21 errors detected in the compilation of "pdb_sscanf.cpp". Makefile:8: recipe for target 'pdb_sscanf.o' failed make[3]: *** [pdb_sscanf.o] Error 2 make[3]: *** Waiting for unfinished jobs.... 21 errors detected in the compilation of "pdb_read.cpp". Makefile:8: recipe for target 'pdb_read.o' failed make[3]: *** [pdb_read.o] Error 2 21 errors detected in the compilation of "pdb_sprntf.cpp". Makefile:8: recipe for target 'pdb_sprntf.o' failed make[3]: *** [pdb_sprntf.o] Error 2 make[3]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/reduce/libpdb' installing ./reduce_src... make[3]: Entering directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/reduce/reduce_src' pgc++ -c -O3 -DAROMATICS_ACCEPT_HBONDS -DCHARFUNCMACROS -DBOOLPREDEFINED -DBRACKETOPERPARMS -DLEFT_JUSTIFY_NUC_RES_OK -DLISTFRIENDFIX -DINCTEMPLATEDEFNS -DHET_DICTIONARY='"/home/amber/amber/ReleaseCandidate/build-pgi/amber16/dat/reduce_wwPDB_het_dict.txt"' -I../libpdb -I../toolclasses -o GraphToHoldScores.o GraphToHoldScores.cpp pgc++ -c -O3 -DAROMATICS_ACCEPT_HBONDS -DCHARFUNCMACROS -DBOOLPREDEFINED -DBRACKETOPERPARMS -DLEFT_JUSTIFY_NUC_RES_OK -DLISTFRIENDFIX -DINCTEMPLATEDEFNS -DHET_DICTIONARY='"/home/amber/amber/ReleaseCandidate/build-pgi/amber16/dat/reduce_wwPDB_het_dict.txt"' -I../libpdb -I../toolclasses -o reduce.o reduce.cpp pgc++ -c -O3 -DAROMATICS_ACCEPT_HBONDS -DCHARFUNCMACROS -DBOOLPREDEFINED -DBRACKETOPERPARMS -DLEFT_JUSTIFY_NUC_RES_OK -DLISTFRIENDFIX -DINCTEMPLATEDEFNS -DHET_DICTIONARY='"/home/amber/amber/ReleaseCandidate/build-pgi/amber16/dat/reduce_wwPDB_het_dict.txt"' -I../libpdb -I../toolclasses -o CTab.o CTab.cpp "/usr/include/c++/6.3.1/exception", line 64: error: expected a ";" virtual ~exception() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 69: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 81: error: expected a ";" virtual ~bad_exception() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 85: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 64: error: expected a ";" virtual ~exception() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 69: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 81: error: expected a ";" virtual ~bad_exception() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 85: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 64: error: expected a ";" virtual ~exception() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 69: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 81: error: expected a ";" virtual ~bad_exception() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/exception", line 85: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/bits/stl_list.h", line 1919: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(noexcept(__x.swap(__y))) ^ "/usr/include/c++/6.3.1/bits/stl_vector.h", line 1558: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(noexcept(__x.swap(__y))) ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 381: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(is_nothrow_default_constructible<_Alloc>::value) ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 381: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(is_nothrow_default_constructible<_Alloc>::value) ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 5289: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(noexcept(__lhs.swap(__rhs))) ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 5312: error: "operator>>" is not a class or function template name in the current scope operator>>(basic_istream& __is, basic_string& __str); ^ "/usr/include/c++/6.3.1/bits/basic_string.tcc", line 348: error: declaration is incompatible with "void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::resize(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type)" (declared at line 827 of "/usr/include/c++/6.3.1/bits/basic_string.h") resize(size_type __n, _CharT __c) ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 5289: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(noexcept(__lhs.swap(__rhs))) ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 5312: error: "operator>>" is not a class or function template name in the current scope operator>>(basic_istream& __is, basic_string& __str); ^ "/usr/include/c++/6.3.1/bits/basic_string.tcc", line 348: error: declaration is incompatible with "void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::resize(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type)" (declared at line 827 of "/usr/include/c++/6.3.1/bits/basic_string.h") resize(size_type __n, _CharT __c) ^ "/usr/include/c++/6.3.1/stdexcept", line 120: error: expected a ";" logic_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 132: error: expected a ";" virtual ~logic_error() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 137: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 150: error: expected a ";" explicit domain_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 161: error: expected a ";" explicit invalid_argument(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 173: error: expected a ";" explicit length_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 185: error: expected a ";" explicit out_of_range(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 204: error: expected a ";" runtime_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 216: error: expected a ";" virtual ~runtime_error() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 221: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 233: error: expected a ";" explicit range_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 244: error: expected a ";" explicit overflow_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 255: error: expected a ";" explicit underflow_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 120: error: expected a ";" logic_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 132: error: expected a ";" virtual ~logic_error() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 137: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 150: error: expected a ";" explicit domain_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 161: error: expected a ";" explicit invalid_argument(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 173: error: expected a ";" explicit length_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 185: error: expected a ";" explicit out_of_range(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 204: error: expected a ";" runtime_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 216: error: expected a ";" virtual ~runtime_error() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 221: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 233: error: expected a ";" explicit range_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 244: error: expected a ";" explicit overflow_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 255: error: expected a ";" explicit underflow_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 381: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(is_nothrow_default_constructible<_Alloc>::value) ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 5289: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(noexcept(__lhs.swap(__rhs))) ^ "/usr/include/c++/6.3.1/bits/basic_string.h", line 5312: error: "operator>>" is not a class or function template name in the current scope operator>>(basic_istream& __is, basic_string& __str); ^ "/usr/include/c++/6.3.1/bits/basic_string.tcc", line 348: error: declaration is incompatible with "void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::resize(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type)" (declared at line 827 of "/usr/include/c++/6.3.1/bits/basic_string.h") resize(size_type __n, _CharT __c) ^ "/usr/include/c++/6.3.1/stdexcept", line 120: error: expected a ";" logic_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 132: error: expected a ";" virtual ~logic_error() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 137: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 150: error: expected a ";" explicit domain_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 161: error: expected a ";" explicit invalid_argument(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 173: error: expected a ";" explicit length_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 185: error: expected a ";" explicit out_of_range(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 204: error: expected a ";" runtime_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 216: error: expected a ";" virtual ~runtime_error() _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 221: error: expected a ";" what() const _GLIBCXX_TXN_SAFE_DYN _GLIBCXX_USE_NOEXCEPT; ^ "/usr/include/c++/6.3.1/stdexcept", line 233: error: expected a ";" explicit range_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 244: error: expected a ";" explicit overflow_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/stdexcept", line 255: error: expected a ";" explicit underflow_error(const string& __arg) _GLIBCXX_TXN_SAFE; ^ "/usr/include/c++/6.3.1/bits/stl_vector.h", line 1558: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(noexcept(__x.swap(__y))) ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 162: error: the global scope has no "acos" using ::acos; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 181: error: the global scope has no "asin" using ::asin; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 240: error: the global scope has no "ceil" using ::ceil; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 278: error: the global scope has no "cosh" using ::cosh; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 335: error: the global scope has no "floor" using ::floor; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 354: error: the global scope has no "fmod" using ::fmod; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 375: error: the global scope has no "frexp" using ::frexp; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 394: error: the global scope has no "ldexp" using ::ldexp; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 451: error: the global scope has no "modf" using ::modf; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 519: error: the global scope has no "sinh" using ::sinh; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 576: error: the global scope has no "tanh" using ::tanh; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 162: error: the global scope has no "acos" using ::acos; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 181: error: the global scope has no "asin" using ::asin; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 240: error: the global scope has no "ceil" using ::ceil; ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 929: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(__is_nothrow_swappable<_Compare>::value); ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 278: error: the global scope has no "cosh" using ::cosh; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 335: error: the global scope has no "floor" using ::floor; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 354: error: the global scope has no "fmod" using ::fmod; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 375: error: the global scope has no "frexp" using ::frexp; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 394: error: the global scope has no "ldexp" using ::ldexp; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 451: error: the global scope has no "modf" using ::modf; ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1777: error: member function "std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::swap" may not be redeclared outside its class swap(_Rb_tree& __t) ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1778: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(__is_nothrow_swappable<_Compare>::value) ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1803: error: expected a declaration else ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1816: error: expected a ";" _Alloc_traits::_S_on_swap(_M_get_Node_allocator(), ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1818: error: expected a declaration } ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1850: error: expected a declaration } ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1954: error: expected a declaration else ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1956: error: expected a declaration } ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1959: error: expected a declaration } ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1979: error: expected a declaration } ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 519: error: the global scope has no "sinh" using ::sinh; ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 2039: error: expected a declaration else ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 2041: error: expected a declaration } ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 2044: error: expected a declaration } ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 576: error: the global scope has no "tanh" using ::tanh; ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 2358: error: _Rb_tree is not a template _Rb_tree<_Key,_Val,_KeyOfValue,_Compare,_Alloc>::__rb_verify() const ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 2358: error: a type qualifier is not allowed on a nonmember function _Rb_tree<_Key,_Val,_KeyOfValue,_Compare,_Alloc>::__rb_verify() const ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 2394: error: expected a declaration } // namespace ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 121: error: identifier "_Compare" is undefined value_compare(_Compare __c) ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 122: error: expected a "{" : comp(__c) { } ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 124: error: expected a declaration public: ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 129: error: expected a declaration private: ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 134: error: _Rb_tree is not a template typedef _Rb_tree, ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 134: error: identifier "key_type" is undefined typedef _Rb_tree, ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 134: error: identifier "value_type" is undefined typedef _Rb_tree, ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 134: error: identifier "_Select1st" is undefined typedef _Rb_tree, ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 134: error: expected an identifier typedef _Rb_tree, ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 135: error: expected a ";" key_compare, _Pair_alloc_type> _Rep_type; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 138: error: identifier "_Rep_type" is undefined _Rep_type _M_t; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 140: error: "_Alloc_traits" has already been declared in the current scope typedef __gnu_cxx::__alloc_traits<_Pair_alloc_type> _Alloc_traits; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 142: error: expected a declaration public: ^ "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 120: error: a class or namespace qualified name is required typedef typename _Alloc::pointer pointer; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 120: error: global-scope qualifier (leading "::") is not allowed typedef typename _Alloc::pointer pointer; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 120: error: expected a ";" typedef typename _Alloc::pointer pointer; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 121: error: a class or namespace qualified name is required typedef typename _Alloc::const_pointer const_pointer; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 121: error: global-scope qualifier (leading "::") is not allowed typedef typename _Alloc::const_pointer const_pointer; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 121: error: expected a ";" typedef typename _Alloc::const_pointer const_pointer; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 122: error: a class or namespace qualified name is required typedef typename _Alloc::value_type value_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 122: error: global-scope qualifier (leading "::") is not allowed typedef typename _Alloc::value_type value_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 122: error: expected a ";" typedef typename _Alloc::value_type value_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 123: error: a class or namespace qualified name is required typedef typename _Alloc::reference reference; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 123: error: global-scope qualifier (leading "::") is not allowed typedef typename _Alloc::reference reference; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 123: error: expected a ";" typedef typename _Alloc::reference reference; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 124: error: a class or namespace qualified name is required typedef typename _Alloc::const_reference const_reference; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 124: error: global-scope qualifier (leading "::") is not allowed typedef typename _Alloc::const_reference const_reference; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 124: error: expected a ";" typedef typename _Alloc::const_reference const_reference; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 125: error: a class or namespace qualified name is required typedef typename _Alloc::size_type size_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 125: error: global-scope qualifier (leading "::") is not allowed typedef typename _Alloc::size_type size_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 125: error: expected a ";" typedef typename _Alloc::size_type size_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 126: error: a class or namespace qualified name is required typedef typename _Alloc::difference_type difference_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 126: error: global-scope qualifier (leading "::") is not allowed typedef typename _Alloc::difference_type difference_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 126: error: expected a ";" typedef typename _Alloc::difference_type difference_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 128: error: identifier "pointer" is undefined static pointer ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 129: error: identifier "size_type" is undefined allocate(_Alloc& __a, size_type __n) ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 132: error: identifier "pointer" is undefined static void deallocate(_Alloc& __a, pointer __p, size_type __n) ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 132: error: identifier "size_type" is undefined static void deallocate(_Alloc& __a, pointer __p, size_type __n) ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 136: error: identifier "pointer" is undefined static void construct(_Alloc& __a, pointer __p, const _Tp& __arg) ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 139: error: identifier "pointer" is undefined static void destroy(_Alloc& __a, pointer __p) ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 142: error: identifier "size_type" is undefined static size_type max_size(const _Alloc& __a) ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/bits/stl_map.h", line 146: error: class "__gnu_cxx::__alloc_traits<_Pair_alloc_type>" has no member "const_pointer" typedef typename _Alloc_traits::const_pointer const_pointer; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 147: error: class "__gnu_cxx::__alloc_traits<_Pair_alloc_type>" has no member "reference" typedef typename _Alloc_traits::reference reference; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 148: error: class "__gnu_cxx::__alloc_traits<_Pair_alloc_type>" has no member "const_reference" typedef typename _Alloc_traits::const_reference const_reference; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 149: error: a class or namespace qualified name is required typedef typename _Rep_type::iterator iterator; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 149: error: expected a ";" typedef typename _Rep_type::iterator iterator; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 150: error: a class or namespace qualified name is required typedef typename _Rep_type::const_iterator const_iterator; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 150: error: expected a ";" typedef typename _Rep_type::const_iterator const_iterator; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 151: error: a class or namespace qualified name is required typedef typename _Rep_type::size_type size_type; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 151: error: expected a ";" typedef typename _Rep_type::size_type size_type; ^ Error limit reached. 100 errors detected in the compilation of "CTab.cpp". Compilation terminated. Makefile:33: recipe for target 'CTab.o' failed make[3]: *** [CTab.o] Error 2 make[3]: *** Waiting for unfinished jobs.... "/usr/include/c++/6.3.1/bits/stl_vector.h", line 1558: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(noexcept(__x.swap(__y))) ^ "/usr/include/c++/6.3.1/bits/stl_list.h", line 1919: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(noexcept(__x.swap(__y))) ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 929: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(__is_nothrow_swappable<_Compare>::value); ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1777: error: member function "std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::swap" may not be redeclared outside its class swap(_Rb_tree& __t) ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1778: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(__is_nothrow_swappable<_Compare>::value) ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1803: error: expected a declaration else ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1816: error: expected a ";" _Alloc_traits::_S_on_swap(_M_get_Node_allocator(), ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1818: error: expected a declaration } ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1850: error: expected a declaration } ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1954: error: expected a declaration else ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1956: error: expected a declaration } ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1959: error: expected a declaration } ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1979: error: expected a declaration } ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 2039: error: expected a declaration else ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 2041: error: expected a declaration } ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 2044: error: expected a declaration } ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 2358: error: _Rb_tree is not a template _Rb_tree<_Key,_Val,_KeyOfValue,_Compare,_Alloc>::__rb_verify() const ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 2358: error: a type qualifier is not allowed on a nonmember function _Rb_tree<_Key,_Val,_KeyOfValue,_Compare,_Alloc>::__rb_verify() const ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 2394: error: expected a declaration } // namespace ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 121: error: identifier "_Compare" is undefined value_compare(_Compare __c) ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 122: error: expected a "{" : comp(__c) { } ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 124: error: expected a declaration public: ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 129: error: expected a declaration private: ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 134: error: _Rb_tree is not a template typedef _Rb_tree, ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 134: error: identifier "key_type" is undefined typedef _Rb_tree, ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 134: error: identifier "value_type" is undefined typedef _Rb_tree, ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 134: error: identifier "_Select1st" is undefined typedef _Rb_tree, ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 134: error: expected an identifier typedef _Rb_tree, ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 135: error: expected a ";" key_compare, _Pair_alloc_type> _Rep_type; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 138: error: identifier "_Rep_type" is undefined _Rep_type _M_t; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 140: error: "_Alloc_traits" has already been declared in the current scope typedef __gnu_cxx::__alloc_traits<_Pair_alloc_type> _Alloc_traits; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 142: error: expected a declaration public: ^ "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 120: error: a class or namespace qualified name is required typedef typename _Alloc::pointer pointer; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 120: error: global-scope qualifier (leading "::") is not allowed typedef typename _Alloc::pointer pointer; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 120: error: expected a ";" typedef typename _Alloc::pointer pointer; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 121: error: a class or namespace qualified name is required typedef typename _Alloc::const_pointer const_pointer; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 121: error: global-scope qualifier (leading "::") is not allowed typedef typename _Alloc::const_pointer const_pointer; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 121: error: expected a ";" typedef typename _Alloc::const_pointer const_pointer; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 122: error: a class or namespace qualified name is required typedef typename _Alloc::value_type value_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 122: error: global-scope qualifier (leading "::") is not allowed typedef typename _Alloc::value_type value_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 122: error: expected a ";" typedef typename _Alloc::value_type value_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 123: error: a class or namespace qualified name is required typedef typename _Alloc::reference reference; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 123: error: global-scope qualifier (leading "::") is not allowed typedef typename _Alloc::reference reference; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 123: error: expected a ";" typedef typename _Alloc::reference reference; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 124: error: a class or namespace qualified name is required typedef typename _Alloc::const_reference const_reference; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 124: error: global-scope qualifier (leading "::") is not allowed typedef typename _Alloc::const_reference const_reference; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 124: error: expected a ";" typedef typename _Alloc::const_reference const_reference; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 125: error: a class or namespace qualified name is required typedef typename _Alloc::size_type size_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 125: error: global-scope qualifier (leading "::") is not allowed typedef typename _Alloc::size_type size_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 125: error: expected a ";" typedef typename _Alloc::size_type size_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 126: error: a class or namespace qualified name is required typedef typename _Alloc::difference_type difference_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 126: error: global-scope qualifier (leading "::") is not allowed typedef typename _Alloc::difference_type difference_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 126: error: expected a ";" typedef typename _Alloc::difference_type difference_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 128: error: identifier "pointer" is undefined static pointer ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 129: error: identifier "size_type" is undefined allocate(_Alloc& __a, size_type __n) ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 132: error: identifier "pointer" is undefined static void deallocate(_Alloc& __a, pointer __p, size_type __n) ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 132: error: identifier "size_type" is undefined static void deallocate(_Alloc& __a, pointer __p, size_type __n) ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 136: error: identifier "pointer" is undefined static void construct(_Alloc& __a, pointer __p, const _Tp& __arg) ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 139: error: identifier "pointer" is undefined static void destroy(_Alloc& __a, pointer __p) ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 142: error: identifier "size_type" is undefined static size_type max_size(const _Alloc& __a) ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/bits/stl_map.h", line 146: error: class "__gnu_cxx::__alloc_traits<_Pair_alloc_type>" has no member "const_pointer" typedef typename _Alloc_traits::const_pointer const_pointer; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 147: error: class "__gnu_cxx::__alloc_traits<_Pair_alloc_type>" has no member "reference" typedef typename _Alloc_traits::reference reference; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 148: error: class "__gnu_cxx::__alloc_traits<_Pair_alloc_type>" has no member "const_reference" typedef typename _Alloc_traits::const_reference const_reference; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 149: error: a class or namespace qualified name is required typedef typename _Rep_type::iterator iterator; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 149: error: expected a ";" typedef typename _Rep_type::iterator iterator; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 150: error: a class or namespace qualified name is required typedef typename _Rep_type::const_iterator const_iterator; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 150: error: expected a ";" typedef typename _Rep_type::const_iterator const_iterator; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 151: error: a class or namespace qualified name is required typedef typename _Rep_type::size_type size_type; ^ Error limit reached. 100 errors detected in the compilation of "GraphToHoldScores.cpp". Compilation terminated. Makefile:33: recipe for target 'GraphToHoldScores.o' failed make[3]: *** [GraphToHoldScores.o] Error 2 "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 162: error: the global scope has no "acos" using ::acos; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 181: error: the global scope has no "asin" using ::asin; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 240: error: the global scope has no "ceil" using ::ceil; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 278: error: the global scope has no "cosh" using ::cosh; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 335: error: the global scope has no "floor" using ::floor; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 354: error: the global scope has no "fmod" using ::fmod; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 375: error: the global scope has no "frexp" using ::frexp; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 394: error: the global scope has no "ldexp" using ::ldexp; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 451: error: the global scope has no "modf" using ::modf; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 519: error: the global scope has no "sinh" using ::sinh; ^ "/opt/pgi/linux86-64/16.10/include-gcc50/cmath", line 576: error: the global scope has no "tanh" using ::tanh; ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 929: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(__is_nothrow_swappable<_Compare>::value); ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1777: error: member function "std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::swap" may not be redeclared outside its class swap(_Rb_tree& __t) ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1778: error: expected a ";" _GLIBCXX_NOEXCEPT_IF(__is_nothrow_swappable<_Compare>::value) ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1803: error: expected a declaration else ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1816: error: expected a ";" _Alloc_traits::_S_on_swap(_M_get_Node_allocator(), ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1818: error: expected a declaration } ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1850: error: expected a declaration } ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1954: error: expected a declaration else ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1956: error: expected a declaration } ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1959: error: expected a declaration } ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 1979: error: expected a declaration } ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 2039: error: expected a declaration else ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 2041: error: expected a declaration } ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 2044: error: expected a declaration } ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 2358: error: _Rb_tree is not a template _Rb_tree<_Key,_Val,_KeyOfValue,_Compare,_Alloc>::__rb_verify() const ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 2358: error: a type qualifier is not allowed on a nonmember function _Rb_tree<_Key,_Val,_KeyOfValue,_Compare,_Alloc>::__rb_verify() const ^ "/usr/include/c++/6.3.1/bits/stl_tree.h", line 2394: error: expected a declaration } // namespace ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 121: error: identifier "_Compare" is undefined value_compare(_Compare __c) ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 122: error: expected a "{" : comp(__c) { } ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 124: error: expected a declaration public: ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 129: error: expected a declaration private: ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 134: error: _Rb_tree is not a template typedef _Rb_tree, ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 134: error: identifier "key_type" is undefined typedef _Rb_tree, ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 134: error: identifier "value_type" is undefined typedef _Rb_tree, ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 134: error: identifier "_Select1st" is undefined typedef _Rb_tree, ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 134: error: expected an identifier typedef _Rb_tree, ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 135: error: expected a ";" key_compare, _Pair_alloc_type> _Rep_type; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 138: error: identifier "_Rep_type" is undefined _Rep_type _M_t; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 140: error: "_Alloc_traits" has already been declared in the current scope typedef __gnu_cxx::__alloc_traits<_Pair_alloc_type> _Alloc_traits; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 142: error: expected a declaration public: ^ "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 120: error: a class or namespace qualified name is required typedef typename _Alloc::pointer pointer; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 120: error: global-scope qualifier (leading "::") is not allowed typedef typename _Alloc::pointer pointer; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 120: error: expected a ";" typedef typename _Alloc::pointer pointer; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 121: error: a class or namespace qualified name is required typedef typename _Alloc::const_pointer const_pointer; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 121: error: global-scope qualifier (leading "::") is not allowed typedef typename _Alloc::const_pointer const_pointer; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 121: error: expected a ";" typedef typename _Alloc::const_pointer const_pointer; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 122: error: a class or namespace qualified name is required typedef typename _Alloc::value_type value_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 122: error: global-scope qualifier (leading "::") is not allowed typedef typename _Alloc::value_type value_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 122: error: expected a ";" typedef typename _Alloc::value_type value_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 123: error: a class or namespace qualified name is required typedef typename _Alloc::reference reference; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 123: error: global-scope qualifier (leading "::") is not allowed typedef typename _Alloc::reference reference; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 123: error: expected a ";" typedef typename _Alloc::reference reference; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 124: error: a class or namespace qualified name is required typedef typename _Alloc::const_reference const_reference; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 124: error: global-scope qualifier (leading "::") is not allowed typedef typename _Alloc::const_reference const_reference; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 124: error: expected a ";" typedef typename _Alloc::const_reference const_reference; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 125: error: a class or namespace qualified name is required typedef typename _Alloc::size_type size_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 125: error: global-scope qualifier (leading "::") is not allowed typedef typename _Alloc::size_type size_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 125: error: expected a ";" typedef typename _Alloc::size_type size_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 126: error: a class or namespace qualified name is required typedef typename _Alloc::difference_type difference_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 126: error: global-scope qualifier (leading "::") is not allowed typedef typename _Alloc::difference_type difference_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 126: error: expected a ";" typedef typename _Alloc::difference_type difference_type; ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 128: error: identifier "pointer" is undefined static pointer ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 129: error: identifier "size_type" is undefined allocate(_Alloc& __a, size_type __n) ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 132: error: identifier "pointer" is undefined static void deallocate(_Alloc& __a, pointer __p, size_type __n) ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 132: error: identifier "size_type" is undefined static void deallocate(_Alloc& __a, pointer __p, size_type __n) ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 136: error: identifier "pointer" is undefined static void construct(_Alloc& __a, pointer __p, const _Tp& __arg) ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 139: error: identifier "pointer" is undefined static void destroy(_Alloc& __a, pointer __p) ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/ext/alloc_traits.h", line 142: error: identifier "size_type" is undefined static size_type max_size(const _Alloc& __a) ^ detected during instantiation of class "__gnu_cxx::__alloc_traits<_Alloc> [with _Alloc=_Pair_alloc_type]" at line 146 of "/usr/include/c++/6.3.1/bits/stl_map.h" "/usr/include/c++/6.3.1/bits/stl_map.h", line 146: error: class "__gnu_cxx::__alloc_traits<_Pair_alloc_type>" has no member "const_pointer" typedef typename _Alloc_traits::const_pointer const_pointer; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 147: error: class "__gnu_cxx::__alloc_traits<_Pair_alloc_type>" has no member "reference" typedef typename _Alloc_traits::reference reference; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 148: error: class "__gnu_cxx::__alloc_traits<_Pair_alloc_type>" has no member "const_reference" typedef typename _Alloc_traits::const_reference const_reference; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 149: error: a class or namespace qualified name is required typedef typename _Rep_type::iterator iterator; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 149: error: expected a ";" typedef typename _Rep_type::iterator iterator; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 150: error: a class or namespace qualified name is required typedef typename _Rep_type::const_iterator const_iterator; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 150: error: expected a ";" typedef typename _Rep_type::const_iterator const_iterator; ^ "/usr/include/c++/6.3.1/bits/stl_map.h", line 151: error: a class or namespace qualified name is required typedef typename _Rep_type::size_type size_type; ^ Error limit reached. 100 errors detected in the compilation of "reduce.cpp". Compilation terminated. Makefile:33: recipe for target 'reduce.o' failed make[3]: *** [reduce.o] Error 2 make[3]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/reduce/reduce_src' Makefile:19: recipe for target 'install' failed make[2]: *** [install] Error 2 make[2]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src/reduce' Makefile:17: recipe for target 'serial' failed make[1]: *** [serial] Error 2 make[1]: Leaving directory '/home/amber/amber/ReleaseCandidate/build-pgi/amber16/AmberTools/src' Makefile:7: recipe for target 'install' failed make: *** [install] Error 2