Something looks to be messed up with the netcdf dependencies.
The following works:
cd $AMBERHOME
git pull
git clean -f -d -x
./configure gnu
make -j8 install
make clean
./configure -cuda gnu
make -j8 install
But the following does not:
git clean -f -d -x
./configure -cuda gnu
make -j8 install
gfortran -I../libsrc -I. -O3 -mtune=native -c -o typeSizes.o typeSizes.f90
gfortran -I../libsrc -I. -O3 -mtune=native -c -o netcdf.o netcdf.f90
netcdf.f90:38.50:
FourByteReal, EightByteReal
1
Fatal Error: Can't open module file 'typesizes.mod' for reading at (1): No
such file or directory
make[4]: *** [netcdf.o] Error 1
make[4]: *** Waiting for unfinished jobs....
gfortran -I../libsrc -I. -O3 -mtune=native -c netcdf.f90 -o netcdf.o
gfortran -I../libsrc -I. -O3 -mtune=native -c typeSizes.f90 -o typeSizes.o
make[4]: Leaving directory
`/server-home1/rcw/cvs_checkouts/amber.git/amber/AmberTools/src/netcdf/src/
f90'
make[3]: *** [install-recursive] Error 1
make[3]: Leaving directory
`/server-home1/rcw/cvs_checkouts/amber.git/amber/AmberTools/src/netcdf/src'
make[2]: *** [/home/rcw/cvs_checkouts/amber.git/amber/include/netcdf.mod]
Error 2
make[2]: Leaving directory
`/server-home1/rcw/cvs_checkouts/amber.git/amber/src'
make[1]: [cuda] Error 2 (ignored)
Any ideas?
/\
\/
|\oss Walker
---------------------------------------------------------
| Assistant Research Professor |
| San Diego Supercomputer Center |
| Adjunct Assistant Professor |
| Dept. of Chemistry and Biochemistry |
| University of California San Diego |
| NVIDIA Fellow |
|
http://www.rosswalker.co.uk |
http://www.wmd-lab.org |
| Tel: +1 858 822 0854 | EMail:- ross.rosswalker.co.uk |
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Received on Wed Mar 27 2013 - 11:30:03 PDT
