Re: [AMBER-Developers] Testing Periodic ICCG pbsa solver under MMPBSA

From: Jason Swails <jason.swails.gmail.com>
Date: Fri, 22 Feb 2013 15:26:27 -0500

Try printing out the string containing solvopt in mmpbsa_energy.nab, so
something like this:

fprintf(stderr, "solvopt=%d, accept=%lf, maxitn=%d, fillratio=%lf,
space=%lf",
              pbopt.solvopt, pbopt.accept, pbopt.maxitn, pbopt.fillratio,
pbopt.space))

prior to sending the string to the mm_options call, just to make sure that
the string is what it appears to be.


On Fri, Feb 22, 2013 at 2:27 PM, <wmsmith.uci.edu> wrote:

> When using
>
> solvopt{Assign}[1-68]
>
> The error message is now reading
> "Error: mm_option: unknown keyword or invalid value: 0,"
> instead of
> "Error: mm_option: unknown keyword or invalid value: solvopt"
> as it did before.
>
> This seems rather strange to me... anyone know why it seems to be showing
> "0" as a keyword?
>
> I haven't made any other modifications as of my last post, other than
> changing the one line in mm_options.l to read as shown above.
>
> -Wes
>
> > On Thu, Feb 21, 2013, wmsmith.uci.edu wrote:
> >> Here were the relevant source file changes (as of last try):
> >> -mm_options.l, Line 160
> >> solvopt{Assign}[1-6]|8 { ECHO; solvopt = setVarInt(yytext);
> >> }
> >
> > Try this:
> >
> > solvopt{Assign}[1-68]
> >
> > [If you really want to use the "|", you have to use parentheses to
> > establish
> > precendence: solvopt{Assign}([1-6]|8).]
> >
> > ...dac
> >
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> > http://lists.ambermd.org/mailman/listinfo/amber-developers
> >
> >
>
>
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>



-- 
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Candidate
352-392-4032
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Received on Fri Feb 22 2013 - 12:30:02 PST
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