Well, it looks like the most recent compiler of pgi that they support is
8.0-6 (as far as I see in the 'module avail').
Thank you for the comment. Probably I need to use other compilers.
On Thu, May 31, 2012 at 2:56 PM, Scott Brozell <sbrozell.rci.rutgers.edu>wrote:
> Hi,
>
> Compiler pgi 7.2-5 is really old. Even conservative compiler updaters
> are at pgi 11.6. In addition, version 7 should have failed the compiler
> version test in amber12 configure2 for RISM and PBSA FFT solver.
>
> http://www.tacc.utexas.edu/user-services/user-guides/ranger-user-guide
> According to this page ranger uses modules; follow the directions there
> for listing pgi versions and then
> module swap "7name" "recentname"
>
> scott
>
> On Thu, May 31, 2012 at 02:40:00PM -0400, InSuk Joung wrote:
> > I just pulled a fresh copy from the git repository and tried compilation
> on
> > TACC ranger but I got this error message below. Does anyone can help
> > resolve the problem?
> > The compiler was pgi 7.2-5.
> >
> > pgCC -c -I/work/01780/isjoung/AMBER/include -O2 -DBINTRAJ -DHASGZ
> -DHASBZ2
> > -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ
> > -I/work/01780/isjoung/AMBER/include -o ClusterList.o ClusterList.cpp
> > "ClusterNode.h", line 24: warning: type qualifier on return type is
> > meaningless
> > inline const int Num() const { return num_; }
> > ^
> >
> > "ClusterNode.h", line 25: warning: type qualifier on return type is
> > meaningless
> > inline const int Centroid() const { return centroid_; }
> > ^
> >
> > "/share/apps/pgi/7.2-5/linux86-64/7.2-5/include/CC/stl/_function_base.h",
> > line 76: error:
> > no operator "<" matches these operands
> > operand types are: const ClusterNode < const ClusterNode
> > bool operator()(const _Tp& __x, const _Tp& __y) const { return __x <
> > __y; }
> > ^
> > detected during:
> > instantiation of "bool std::less<_Tp>::operator()(const _Tp
> &,
> > const _Tp &) const [with _Tp=ClusterNode]" at line
> 161
> > of
> >
> > "/share/apps/pgi/7.2-5/linux86-64/7.2-5/include/CC/stl/_l
> > ist.c"
> > instantiation of "void std::_S_merge(std::list<_Tp, _Alloc>
> &,
> > std::list<_Tp, _Alloc> &, _StrictWeakOrdering)
> [with
> > _Tp=ClusterNode,
> _Alloc=std::allocator<ClusterNode>,
> > _StrictWeakOrdering=std::less<ClusterNode>]" at
> line
> > 187
> > of
> >
> > "/share/apps/pgi/7.2-5/linux86-64/7.2-5/include/CC/stl/_l
> > ist.c"
> > instantiation of "void std::_S_sort(std::list<_Tp, _Alloc> &,
> > _StrictWeakOrdering) [with _Tp=ClusterNode,
> > _Alloc=std::allocator<ClusterNode>,
> > _StrictWeakOrdering=std::less<ClusterNode>]" at
> line
> > 499
> > of
> >
> > "/share/apps/pgi/7.2-5/linux86-64/7.2-5/include/CC/stl/_l
> > ist.h"
> > instantiation of "void std::list<_Tp, _Alloc>::sort() [with
> > _Tp=ClusterNode,
> _Alloc=std::allocator<ClusterNode>]"
> >
> > 1 error detected in the compilation of "ClusterList.cpp".
> > make[3]: *** [ClusterList.o] Error 2
> > make[3]: Leaving directory
> > `/work/01780/isjoung/AMBER/AmberTools/src/cpptraj/src'
> > make[2]: *** [install] Error 2
> > make[2]: Leaving directory
> > `/work/01780/isjoung/AMBER/AmberTools/src/cpptraj'
> > make[1]: *** [serial] Error 2
> > make[1]: Leaving directory `/work/01780/isjoung/AMBER/AmberTools/src'
> > make: *** [install] Error 2
> >
> >
> > --
> > Best,
> > InSuk Joung
> > _______________________________________________
> > AMBER-Developers mailing list
> > AMBER-Developers.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber-developers
>
> _______________________________________________
> AMBER-Developers mailing list
> AMBER-Developers.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber-developers
>
--
Best,
InSuk Joung
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Received on Thu May 31 2012 - 12:30:04 PDT
