Re: [AMBER-Developers] hanging test

From: Francesco Paesani <fpaesani.gmail.com>
Date: Tue, 23 Nov 2010 21:12:16 -0800

Hi Jason,

Thank you for pointing this out. It seems that the fix we committed
works for sander.MPI but not for sander.LES.MPI. I will look into it.

Thanks,
Francesco

On Nov 23, 2010, at 8:38 PM, Jason Swails wrote:

> The following test hangs indefinitely without ever creating an mdout
> file on
> my computer (DO_PARALLEL='mpirun -np 2' on Mac OS X 10.6.5, OpenMPI
> 1.4.1,
> gnu 4.4.5 from MacPorts):
>
> cd PIMD/part_nmpimd_ntp && ./Run.nmpimd
>
> It does, however, create a "fort.277" file, leading me to believe a
> non-master is trying to write to pimd_unit. I'm guessing this may
> have to
> do with recent mods aimed at fixing PIMD parallel execution, but I
> couldn't
> find anything obvious in the relevant commit.
>
> All the best,
> Jason
>
> --
> Jason M. Swails
> Quantum Theory Project,
> University of Florida
> Ph.D. Graduate Student
> 352-392-4032
> _______________________________________________
> AMBER-Developers mailing list
> AMBER-Developers.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber-developers


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